DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl8 and warf-1

DIOPT Version :10

Sequence 1:NP_649769.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_501242.1 Gene:warf-1 / 191609 WormBaseID:WBGene00000190 Length:179 Species:Caenorhabditis elegans


Alignment Length:141 Identity:50/141 - (35%)
Similarity:89/141 - (63%) Gaps:3/141 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWDIGGQPRFRSMWER 84
            |....::||..:||||.:..:...: ..:.|||:|||:..:|...:|:.|||:|||.:.|::|:.
 Worm    17 ECRTLMLGLDGAGKTTILYKLKLNE-TVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKY 80

  Fly    85 YCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDETGLIERMNL 149
            |......:|::||::|::::..::.||.|||.:|:||...:||..||:|:|.|.....|.:.::|
 Worm    81 YFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDL 145

  Fly   150 SSIQDRE--IC 158
            .|:::||  ||
 Worm   146 GSLKNREWFIC 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_649769.1 Arl10_like 22..180 CDD:206724 49/139 (35%)
warf-1NP_501242.1 Arf_Arl 19..176 CDD:206644 49/139 (35%)

Return to query results.
Submit another query.