DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl8 and arf-5

DIOPT Version :10

Sequence 1:NP_649769.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_501336.1 Gene:arf-5 / 177595 WormBaseID:WBGene00000183 Length:180 Species:Caenorhabditis elegans


Alignment Length:168 Identity:53/168 - (31%)
Similarity:92/168 - (54%) Gaps:20/168 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FKSIFWKEEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWDIGGQP 76
            |..:|.|.::.:.:|||..:||||.:..:..|:.. ..|||:|||:..:...|::..|||:|||.
 Worm     9 FNRLFGKRQVRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVETVEYKNISFTVWDVGGQD 72

  Fly    77 RFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDET 141
            :.|.:|..|.:....::::||:.|.:::|.||.|||.:|::.:|....:||..||:|||.|:...
 Worm    73 KIRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNEDELRDATLLVFANKQDLPNAMTAA 137

  Fly   142 GLIERMNLSSIQDREICCYSISCKEKDNIDITLQWLIQ 179
            .|.:::.|.:::.|                   ||.||
 Worm   138 ELTDKLGLHNLRSR-------------------QWYIQ 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_649769.1 Arl10_like 22..180 CDD:206724 50/158 (32%)
arf-5NP_501336.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..179 CDD:476819 53/168 (32%)

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