DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl8 and arl-5

DIOPT Version :10

Sequence 1:NP_649769.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001379051.1 Gene:arl-5 / 176392 WormBaseID:WBGene00000189 Length:178 Species:Caenorhabditis elegans


Alignment Length:172 Identity:47/172 - (27%)
Similarity:93/172 - (54%) Gaps:12/172 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FKSIFWKEEMELTLVGLQFSGKTTFV-NVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWDIGGQ 75
            |:|.:..::.::.:|||..:||||.: |.:...|.  :..||:|.|:.:::..|:...:||||||
 Worm     9 FQSWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQV--ETKPTIGSNVEEVSYRNLDFVIWDIGGQ 71

  Fly    76 PRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDE 140
            ...|..|..|....:.::.::|::|..::...:.:||::|....||...:|||.||:|||||::.
 Worm    72 ESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDLPGAMNP 136

  Fly   141 TGLIERMNLSSIQDREI-----CCYSISCKEKDNIDITLQWL 177
            ..:..::.|.:::....     ||    ..:.:.:...|:|:
 Worm   137 AEVSTQLGLQTLRGARKWQINGCC----AVKGEGLPEALEWI 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_649769.1 Arl10_like 22..180 CDD:206724 45/162 (28%)
arl-5NP_001379051.1 Arl5_Arl8 3..177 CDD:133353 47/172 (27%)

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