DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7878 and DDX23

DIOPT Version :10

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_004809.2 Gene:DDX23 / 9416 HGNCID:17347 Length:820 Species:Homo sapiens


Alignment Length:797 Identity:236/797 - (29%)
Similarity:355/797 - (44%) Gaps:197/797 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SKPNNKYERSIRRDGNSRAYKGDRNDYGGEGRGYRAKRNDYGGGR-RDNRDNYGAGHRDSRDS-- 83
            ||...::....||.|.||:....|:......|.::.:..|....| :.:||....|||..:|.  
Human    41 SKDRKRHRSRDRRRGGSRSRSRSRSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKR 105

  Fly    84 ---AGGGGGDF----------------------SESLSIASEMVGKVIGRGGSNISRIQNDFNVR 123
               :.|.|.||                      ::.||: .|::.|         .:.:.:...:
Human   106 SSLSPGRGKDFKSRKDRDSKKDEEDEHGDKKPKAQPLSL-EELLAK---------KKAEEEAEAK 160

  Fly   124 VK-LDKCDLIVKITGSIQSNV------IDAINHVRKQVTNSG----DRGQDRDNRD--------- 168
            .| |.|.:...:.....|..|      ::.....|||..:.|    :..|:|:.|:         
Human   161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERET 225

  Fly   169 ----------------------HGSNERYDGG-----------------GYDRYKGNSYEFNPTS 194
                                  |...|||.||                 .:|..:..|.::||..
Human   226 NGNEDEEGRQKIREEKDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLY 290

  Fly   195 SESNK----DNGDLTGIIDWEALNKASIAATAARWSKCPPLTKNFYKEAPEVANLTKSEIE---- 251
            .|.::    ..|.:.| ||.:...:...........|...|.:...:|| .:..|.|.|.:    
Human   291 KERHQVQLLGRGFIAG-IDLKQQKREQSRFYGDLMEKRRTLEEKEQEEA-RLRKLRKKEAKQRWD 353

  Fly   252 -----------------RIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYPDMLEEIT 299
                             ||..|:..||.      |.|:    ||||:.:::..... |.:||.|.
Human   354 DRHWSQKKLDEMTDRDWRIFREDYSITT------KGGK----IPNPIRSWKDSSLP-PHILEVID 407

  Fly   300 KMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTR-----GGAN 359
            |.|:.:|:|||.||.||.||..|:||:|:||:|||.|||:|.::.  ..:.|:..|     .|..
Human   408 KCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVW--ITTLPKIDRIEESDQGPY 470

  Fly   360 VLVLAPTRELALQIEMEVKKYSF-RGMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMA 423
            .::||||||||.|||.|..|:.. .|::.|.|.||.:|..|...|..|.||:|.|||||.|::..
Human   471 AIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLEN 535

  Fly   424 NVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDI-----RPD---------------------R 462
            ..:.:|..||:||||||||:||||||.::|::..:     :||                     |
Human   536 RYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYR 600

  Fly   463 QTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLD------------LAATHSVKQIIKLMEDDMDK 515
            ||:|.:||.||.|.|||:||::.|..|.:||..            ::.:...|:::.::|...| 
Human   601 QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFD- 664

  Fly   516 FNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVV 580
                          ..||||..:|...|.|:..|...|:....:||.:.|..||.|::::|:|..
Human   665 --------------PPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAK 715

  Fly   581 RILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELI 645
            .||||||||.||:||:|::.|:|||...|||:|:||:|||||||:.|.:|:|.|:||.|:..||.
Human   716 DILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELK 780

  Fly   646 E-ILQEAEQEVPDELHN 661
            : ||:......|.||.|
Human   781 QAILESPVSSCPPELAN 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH_1 92..152 CDD:459630 9/66 (14%)
DEAD-like_helicase_N 174..663 CDD:475120 197/575 (34%)
DDX23NP_004809.2 RS domain 1..221 37/189 (20%)
PTZ00121 <4..>351 CDD:173412 59/321 (18%)
SF-CC1 80..>209 CDD:273721 25/138 (18%)
Q motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00552 391..419 9/28 (32%)
SrmB 392..783 CDD:440279 160/408 (39%)
DEAD box. /evidence=ECO:0000255|PROSITE-ProRule:PRU00541 549..552 2/2 (100%)

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