DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7878 and DED1

DIOPT Version :10

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_014847.3 Gene:DED1 / 854379 SGDID:S000005730 Length:604 Species:Saccharomyces cerevisiae


Alignment Length:576 Identity:208/576 - (36%)
Similarity:308/576 - (53%) Gaps:57/576 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 RGQDRDNRDHGSNERYDGGGYDRYKGNSYEFNPTSSESNKDNGDLTGIIDWEALNKASIAATAAR 224
            ||:.|..|::.||...:.|||:..:|.. .|...:......||   |..........|...:..|
Yeast    27 RGKPRSARNNSSNYNNNNGGYNGGRGGG-SFFSNNRRGGYGNG---GFFGGNNGGSRSNGRSGGR 87

  Fly   225 W--SKCPPLTKNFYKE-----APEVANLTKSEIERIREENNKITVS--YVFEPKEGETSPPIPNP 280
            |  .|..|..:|...|     .||..|...|.|.....::..:..|  .|.||....||||:...
Yeast    88 WIDGKHVPAPRNEKAEIAIFGVPEDPNFQSSGINFDNYDDIPVDASGKDVPEPITEFTSPPLDGL 152

  Fly   281 VWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHT 345
                         :||.|....|:||:|:|..:.||:..|.|::..||||:|||..||.| ::..
Yeast   153 -------------LLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFP-VLSE 203

  Fly   346 EYQSTP------RGT----RGGANVLVLAPTRELALQIEMEVKKYSFRG-MKAVCVYGGGNRNMQ 399
            .:::.|      :|:    :.....:::|||||||.||..|.||:::|. :||..||||.....|
Yeast   204 SFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQ 268

  Fly   400 ISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVM--LDIRP-- 460
            :.::|||.::::.||||||||:....|.::.:.||||||||||||||||||||.::  .|:.|  
Yeast   269 LREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVG 333

  Fly   461 DRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKN 525
            :|||:|.|||:|..::.||:.::.:.|.:.||.:...:.:..:::  |..::.||.:.:...:. 
Yeast   334 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKV--LYVENQDKKSALLDLLS- 395

  Fly   526 MSSTDKI-IIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVA 589
             :|||.: :||...|..||.|:..|.:..|....|||:|.|.:||:|:|..:||...:||||.||
Yeast   396 -ASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVA 459

  Fly   590 SRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQE 654
            :|||||.::|||||||.|.::::||||:|||||||..|.:.:||..|:..:.|.|.|||.||.||
Yeast   460 ARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQE 524

  Fly   655 VPDELHNMARRFKAMKDKRAAEGGGFGGR--------GGRFGGGRGGGRRNFDQFQ 702
            ||..|.:  ....|...:..:..||||..        ||...||.|..|...:.|:
Yeast   525 VPSFLKD--AMMSAPGSRSNSRRGGFGRNNNRDYRKAGGASAGGWGSSRSRDNSFR 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH_1 92..152 CDD:459630
DEAD-like_helicase_N 174..663 CDD:475120 190/513 (37%)
DED1NP_014847.3 SrmB 141..526 CDD:440279 163/402 (41%)
Blue background indicates that the domain is not in the aligned region.

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