DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7878 and STRS1

DIOPT Version :9

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_174479.1 Gene:STRS1 / 840087 AraportID:AT1G31970 Length:537 Species:Arabidopsis thaliana


Alignment Length:453 Identity:192/453 - (42%)
Similarity:275/453 - (60%) Gaps:30/453 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 KNFYKEAPEVANLTKSEIERIRE---ENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAE--YP 292
            ||..|:.||    .|.|.|.:.|   |..|:.|          |...:....:...:.|||  .|
plant    74 KNKKKDVPE----KKLEAEDLGEGESEQQKVVV----------TGKGVEEAKYAALKTFAESNLP 124

  Fly   293 DMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRGG 357
            :.:.:..|. |.|||||||..||.||.|.|:||||:||:||||||.:|.::|...::...|  ||
plant   125 ENVLDCCKT-FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIG--GG 186

  Fly   358 A-----NVLVLAPTRELALQIEMEVKKYSFR-GMKAVCVYGGGNRNMQISDLERGAEIIICTPGR 416
            :     ..|||:||||||:||...:::.... |:|::|||||.::..|||.:..|.:|:|.||||
plant   187 SKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGR 251

  Fly   417 LNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQS 481
            |.|||.:||:.:|.::::||||||||||||||..:|.::.:....||.:|.|||||..|.:|||.
plant   252 LRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQE 316

  Fly   482 YM-KNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVK-NMSSTDKIIIFCGRKVRADD 544
            :| .|||:|.:||:||||.|.|.|||:::::.......|....| :.|..:::::|...||.|:.
plant   317 FMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKVEAER 381

  Fly   545 LSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHN 609
            |...|...|:....||||:.|.:|.::::..|.|...:|||||||:|||||.|:..||||.||..
plant   382 LERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLT 446

  Fly   610 IEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMARRFKAMKDK 672
            .|:||||:|||||||::|.:.:|||..:..:|.||:.:|:||.|.||.:|.......|..:.|
plant   447 TEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLAGELVNVLREAGQVVPADLLKFGTHVKKKESK 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH-I 92..150 CDD:238053
DEADc 288..489 CDD:238167 102/209 (49%)
DEXDc 298..505 CDD:214692 107/213 (50%)
Helicase_C 514..624 CDD:278689 47/110 (43%)
STRS1NP_174479.1 PTZ00110 83..513 CDD:240273 187/440 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D471730at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.