DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7878 and AT1G20920

DIOPT Version :10

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_173516.1 Gene:AT1G20920 / 838685 AraportID:AT1G20920 Length:1166 Species:Arabidopsis thaliana


Alignment Length:715 Identity:223/715 - (31%)
Similarity:366/715 - (51%) Gaps:90/715 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VHQEYSKPNNKYERSIRRDGNSRAYKGDRNDYGGEGRGYRAKRNDYGGGRR---DNRDNYGAGHR 78
            :..|..|.:.:.|:..||....:..|..:.:...|.:| .|..|:...|:.   :...:...||.
plant   268 LEDEQKKLDEEVEKRRRRVQEWQELKRKKEEAESESKG-DADGNEPKAGKAWTLEGESDDEEGHP 331

  Fly    79 DSR---------DSAGGGGGDFSESLSIASEMVGKVIGRGG------SNISRIQNDFNVRV--KL 126
            :.:         ::.....|| ::.:.:.:|....|...||      ..|..:....|..|  ::
plant   332 EEKSETEMDVDEETKPENDGD-AKMVDLENETAATVSESGGDGAVDEEEIDPLDAFMNTMVLPEV 395

  Fly   127 DK-CDLIVKITGSIQSNVIDAINHVRKQVTNSGDR--------------GQDRDNRDHGSNERYD 176
            :| |:      |:....|.|.....:.....||||              |:|.|: |:...:..|
plant   396 EKFCN------GAPPPAVNDGTLDSKMNGKESGDRPKKGFNKALGRIIQGEDSDS-DYSEPKNDD 453

  Fly   177 GGGYDRYKGNSYEFNPTSSESNKDNGDLTGIIDWEALNKASIAATAARWSKCPPLTKNFYKEAPE 241
            ....|.   :..||   .....|...:...::|...:             :..|..||||.|..:
plant   454 DPSLDE---DDEEF---MKRVKKTKAEKLSLVDHSKI-------------EYEPFRKNFYIEVKD 499

  Fly   242 VANLTKSEIERIREENNKITVSYVFEPK-EGETSPPIPNPVWTFEQCFAEYPDMLEEITKMGFSK 305
            ::.:|:.|:...|:|         .|.| .|:   .:|.|:..:.|. .....:|:.:.|:.:.|
plant   500 ISRMTQEEVNTYRKE---------LELKVHGK---DVPRPIKFWHQT-GLTSKILDTMKKLNYEK 551

  Fly   306 PSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRGGANVLVLAPTRELA 370
            |.|||:||.||::.|.|.||:|:||:||||.|:||.:.|.:.| .|.....|...||:||||||.
plant   552 PMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ-PPVEAGDGPIGLVMAPTRELV 615

  Fly   371 LQIEMEVKKYSF-RGMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMAN---VIDVSTI 431
            .||..:::|:|. .|::.|.||||.....|||:|:||.||::|||||:.|::..:   :.::..:
plant   616 QQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRV 680

  Fly   432 TYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDL 496
            |:||:||||||.||||||||.:::.:|||:|||::.|||:|..|..||:..:..|:::.||...:
plant   681 TFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV 745

  Fly   497 AATHSVKQIIKLME--DDMDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCI 559
            ..    |.|.:|:|  .:.|:|..:...:...|...||::|...:.:.|.|..::....:....:
plant   746 VN----KDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSL 806

  Fly   560 HGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAG 624
            ||.:||.|||..|:|.|:.|..:|:||.||:||||::::..|:|:|.|::.|:||||||||||||
plant   807 HGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAG 871

  Fly   625 RQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMARRF--KAMKDKRAAEGGGFGGRGGRF 687
            |:|.:::|.:.:|...|.:|::.|:.:||.|||:|..:|..|  |..:....|.|.|:||.|.:|
plant   872 RKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKALADGFMVKVKQGIEQAHGTGYGGSGFKF 936

  Fly   688  687
            plant   937  936

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH_1 92..152 CDD:459630 12/68 (18%)
DEAD-like_helicase_N 174..663 CDD:475120 178/495 (36%)
AT1G20920NP_173516.1 PTZ00121 <205..369 CDD:173412 17/102 (17%)
DEADc_DDX46 518..739 CDD:350711 97/225 (43%)
SF2_C_DEAD 750..880 CDD:350174 50/129 (39%)
KH-I_AtRH42_like 1063..1165 CDD:411903
Blue background indicates that the domain is not in the aligned region.

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