DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7878 and AT5G19210

DIOPT Version :10

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_974812.1 Gene:AT5G19210 / 832041 AraportID:AT5G19210 Length:472 Species:Arabidopsis thaliana


Alignment Length:480 Identity:124/480 - (25%)
Similarity:215/480 - (44%) Gaps:108/480 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 TKNFYKEAP--EVANL-----TKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQ-CF 288
            |:...|.:|  .:.||     |.|||     |:|.:|          ||:.|:     |..| |.
plant    36 TRRALKSSPSSRIINLQAVAETSSEI-----ESNSVT----------ETTVPL-----TLRQICQ 80

  Fly   289 AEYPD-MLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLP--GMIHTEYQST 350
            ...|: :|..:.::||..|:.||.:|.|.|..|.|.|..||||:||||.:||.  .:|:.:    
plant    81 GFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQ---- 141

  Fly   351 PRGTRGGANVLVLAPTRELALQI-----------EMEVKKYSFRGMKAVCVYGGGNRNMQISDLE 404
                |.....:::.|||||.:|:           |::||     |...:.:..||......|.|:
plant   142 ----RSSVQAVIVVPTRELGMQVTKVARMLAAKSEIDVK-----GCTVMALLDGGTLRRHKSWLK 197

  Fly   405 RGAE---IIICTPGRLNDLIMANVIDVSTITYLVLDEADRML----DMGFEPQIRKVMLDIR--P 460
              ||   |::.|...|..::..::..:.::..||:||.|.:.    .:|   .:||::....  .
plant   198 --AEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVG---SVRKLLTSFSSCD 257

  Fly   461 DRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKL---------MEDDMDKF 516
            .|||:..||:.|.     .:.::.:.||......|:...| |..|:.:         |.:..:|.
plant   258 KRQTVFASASIPQ-----HKHFVHDCIQQKWTKRDVVHVH-VSAIMPMPLCLLHRFVMCEKTNKH 316

  Fly   517 NTITSFVKNMSSTDKIIIFCGR-----KVRADDLSSELTLDGFMTQ--------CIHGNRDQMDR 568
            ..:.:.::: .:.:..|||.|.     |...:|.|:.|.::...|.        .:.|:.:...|
plant   317 QVLLALLES-DAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSR 380

  Fly   569 EQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGR---AGRQGTSI 630
            ..::.:|:.|...:||:||:|:||:|:.:.||:.|:|.|..:.:|:||.||.||   :.|:....
plant   381 AASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDRKCIVA 445

  Fly   631 SFFTREDWAMAKELIEILQEAEQEV 655
            :..|.|:..       :||..|.|:
plant   446 NLITSEERF-------VLQRYENEL 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH_1 92..152 CDD:459630
DEAD-like_helicase_N 174..663 CDD:475120 124/480 (26%)
AT5G19210NP_974812.1 SrmB 83..460 CDD:440279 104/408 (25%)
Blue background indicates that the domain is not in the aligned region.

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