DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7878 and AT5G14610

DIOPT Version :10

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_196965.2 Gene:AT5G14610 / 831313 AraportID:AT5G14610 Length:712 Species:Arabidopsis thaliana


Alignment Length:634 Identity:228/634 - (35%)
Similarity:331/634 - (52%) Gaps:104/634 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 VKITGSIQSNVIDAINHVRKQVTNSG----------DRGQDRDNRDHG-------------SNER 174
            :.::.|:|:|          |.::||          .||.|....|.|             ||:.
plant    58 IPVSSSVQTN----------QQSSSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDA 112

  Fly   175 YDGGGYDRYKGNSYEFNPTSSESNKDNGDLTGIIDWEA-LNKASIAATAARWSKCPPLTKNFYKE 238
            ..|.|.....|:|....|:|:..|:        :..|| ..|..|..:.   .:.||...:|  |
plant   113 ASGLGNASSGGSSARGPPSSAAGNE--------LSPEAYCRKHEITVSG---GQVPPPLMSF--E 164

  Fly   239 APEVANLTKSEIERIREENNKITVSYVFEP-----------KEGETSPPIPNPVWT-------FE 285
            |..:.|      |.:||..|.:..:..|.|           ....||......:|:       |.
plant   165 ATGLPN------ELLRECPNFMPYALSFVPGAIFALGGANVVRCATSLGFLQIIWSALFGGPNFL 223

  Fly   286 QC-----FAEY---PDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGM 342
            :|     |..|   |.....:...|||.|||||:|:|||.:|..|::.||:||:||||.:|:||.
plant   224 RCPPAAGFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGF 288

  Fly   343 IHTEYQSTPRGTRGGANVLVLAPTRELALQIEMEVKKYSFRG-MKAVCVYGGGNRNMQISDLERG 406
            :|  .|.....:|.|..:|||:||||||.||::|..|:.... :...|:|||..:..|:.::|||
plant   289 MH--LQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERG 351

  Fly   407 AEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATW 471
            .:|::.|||||||::....|.:..::|||||||||||||||||||||::.::...|||:|.:|||
plant   352 VDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATW 416

  Fly   472 PPGVRRLAQSYMKNPIQVCVGSLD-LAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIF 535
            |..||::|...:.||.||.:|::| |.|..|:.|.|:::. .|:|.:.:...:::.....|||||
plant   417 PKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLA-PMEKHSRLEQILRSQEPGSKIIIF 480

  Fly   536 CGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITH 600
            |..|...|.|:..||.. |....|||::.|.:|:..:...:||...:|||||||:||||::||..
plant   481 CSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRV 544

  Fly   601 VINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMARR 665
            |:|||||:.:|:||||:|||||||..|.:.:||..:|...|.:||:||:.|.|:||.::..||.|
plant   545 VVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMATR 609

  Fly   666 -------FKAMKDKRAAEGGGFGGRGGRFGGGRG------------GGR 695
                   |:......:..|||.||.|....||||            |||
plant   610 GGGGMNKFRRWGTPSSGGGGGRGGYGDSGYGGRGESGYGSRGDSGYGGR 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH_1 92..152 CDD:459630 3/18 (17%)
DEAD-like_helicase_N 174..663 CDD:475120 198/517 (38%)
AT5G14610NP_196965.2 WW 17..47 CDD:459800
SrmB 247..603 CDD:440279 167/359 (47%)
Blue background indicates that the domain is not in the aligned region.

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