DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7878 and Ddx17

DIOPT Version :9

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_951062.1 Gene:Ddx17 / 67040 MGIID:1914290 Length:652 Species:Mus musculus


Alignment Length:576 Identity:232/576 - (40%)
Similarity:330/576 - (57%) Gaps:87/576 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 GDRGQDRDNRDHGSNERYDGGGYDRYKGNSYEFNPTSSESNKDNGDLTGIIDWEALNKASIAATA 222
            |||.:|||.           ||:....|:..   |.....|..          |.|.|       
Mouse     7 GDRDRDRDR-----------GGFGARGGSGL---PPKKFGNPG----------ERLRK------- 40

  Fly   223 ARW--SKCPPLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFE 285
            .:|  |:.|...||||.|.||||.||..|::.:|.: .:|||      :.|:.   .|.||:.|.
Mouse    41 KKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRK-KEITV------RGGDV---CPKPVFAFH 95

  Fly   286 QCFAEYPD-MLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQS 349
            .  |.:|. :::.:....|::|:|||.|.:|:.|.|.||:||||||:|||||:|||.::|..:| 
Mouse    96 H--ANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ- 157

  Fly   350 TPRGTRG-GANVLVLAPTRELALQIEMEVKKY-SFRGMKAVCVYGGGNRNMQISDLERGAEIIIC 412
             |...|| |...||||||||||.|::.....| ....:|:.|:|||..:..||.|||||.||.|.
Mouse   158 -PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIA 221

  Fly   413 TPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRR 477
            |||||.|.:.:...::...||||||||||||||||||||||::..|||||||:|.|||||..||:
Mouse   222 TPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 286

  Fly   478 LAQSYMKNPIQVCVGSLDLAATHSVKQIIKL-MEDDMDKFNTITSFVKNM--SSTDKIIIFCGRK 539
            ||:.::::..|:.||:|:|:|.|::.||:.: ||.:.|  :.:...::.:  ...:|.|||...|
Mouse   287 LAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKD--HKLIQLMEEIMAEKENKTIIFVETK 349

  Fly   540 VRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINY 604
            .|.|||:..:..||:...||||::.|.:|:..:.:.:||...||:||||||||||:||:..||||
Mouse   350 RRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINY 414

  Fly   605 DFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMARRFKAM 669
            |:|::.|:||||:|||.|:..:||:.:|||..:...|:|||::|:||.|.:..:|..:.      
Mouse   415 DYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLV------ 473

  Fly   670 KDKRAAEGGGFGGRGG-----------------------RFGGGRGGGRRNFDQFQ 702
             |.|.  |||.||:||                       |..|.:.||||:...::
Mouse   474 -DHRG--GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSTSYR 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH-I 92..150 CDD:238053
DEADc 288..489 CDD:238167 105/203 (52%)
DEXDc 298..505 CDD:214692 110/208 (53%)
Helicase_C 514..624 CDD:278689 49/111 (44%)
Ddx17NP_951062.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 12/54 (22%)
DEXDc 32..502 CDD:331760 216/511 (42%)
Q motif 92..120 7/29 (24%)
DEAD box 246..249 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 585..652
Interaction with YAP1. /evidence=ECO:0000250|UniProtKB:Q92841 641..649
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S387
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000439
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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