DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7878 and ddx17

DIOPT Version :10

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_001016781.1 Gene:ddx17 / 549535 XenbaseID:XB-GENE-1000758 Length:609 Species:Xenopus tropicalis


Alignment Length:572 Identity:233/572 - (40%)
Similarity:324/572 - (56%) Gaps:91/572 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 RGQDRDNRDHGSNERYDGGGYDRYKGNSYEF-NPTSSESNKDNGDLTGIIDWEALNKASIAATAA 223
            ||...| ||.|.     |.|..|:.    :| ||                 .|.|.|       .
 Frog     2 RGSFMD-RDRGG-----GAGMSRFP----KFGNP-----------------GERLRK-------K 32

  Fly   224 RW--SKCPPLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQ 286
            ||  |:.|...||||.|.||||.:|:.::|.:|.: .:||:..|..||          |::.|.|
 Frog    33 RWDLSELPKFEKNFYTEHPEVARMTQHDVEELRRK-KEITIRGVNCPK----------PIYGFHQ 86

  Fly   287 C-FAEYPDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQST 350
            . |.:|  :|:.:....|.:|:|||.|.:|:.|.|.||:||||||:|||||:|||.|:|..:|  
 Frog    87 ANFPQY--VLDVLIDQRFKEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAMVHINHQ-- 147

  Fly   351 PRGTRG-GANVLVLAPTRELALQIEMEVKKY--SFRGMKAVCVYGGGNRNMQISDLERGAEIIIC 412
            |...|| |...||||||||||.|::.....|  |.| :|:.|:|||..:..||.|||||.||.|.
 Frog   148 PYLERGDGPICLVLAPTRELAQQVQQVADDYGKSSR-LKSTCIYGGAPKGPQIRDLERGVEICIA 211

  Fly   413 TPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRR 477
            |||||.|.:.|...::...||||||||||||||||||||||::..|||||||:|.|||||..||:
 Frog   212 TPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 276

  Fly   478 LAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTD-KIIIFCGRKVR 541
            ||:.::::.:|:.:|:|:|:|.|::.||:.:.::.......|....:.|:..: |.|||...|.|
 Frog   277 LAEDFLRDYVQINIGNLELSANHNILQIVDVCQESEKDHKLIQLMEEIMAEKENKTIIFVETKRR 341

  Fly   542 ADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDF 606
            .|||:..:..||:...||||::.|.:|:..:.:.::|...||:||||||||||:|||..|||||:
 Frog   342 CDDLTRRMRRDGWPAMCIHGDKSQQERDWVLCEFRTGKAPILIATDVASRGLDVEDIKFVINYDY 406

  Fly   607 PHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMARRFKAMKD 671
            |::.|:||||:|||.|:..:||:.:|||..:...|:||:::|:||.|.:..:|..:...      
 Frog   407 PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELVKVLEEANQTINPKLMQLVDH------ 465

  Fly   672 KRAAEGGGFGGRG------------------------GRFGGGRGGGRRNFD 699
               ..|||.|||.                        |:.||.|.|...|.|
 Frog   466 ---GRGGGGGGRSRYRSIPTNNNPNMMYQEECNRRMHGKDGGRRDGRNNNRD 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH_1 92..152 CDD:459630
DEAD-like_helicase_N 174..663 CDD:475120 214/496 (43%)
ddx17NP_001016781.1 DEAD-like_helicase_N 11..462 CDD:475120 215/499 (43%)
Blue background indicates that the domain is not in the aligned region.

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