Protein Alignment CG7878 and pit

DIOPT Version :9

• Sequence 1: NP_649767.1
• Gene: CG7878 / 40959
• FlyBaseID: FBgn0037549
• Length: 703
• Species: Drosophila melanogaster
• Sequence 2: NP_001287459.1
• Gene: pit / 42595
• FlyBaseID: FBgn0266581
• Length: 680
• Species: Drosophila melanogaster
• Alignment Length: 662
• Identity: 165/662 - (24%)
• Similarity: 271/662 - (40%)
• Gaps: 163/662 - (24%)

  Fly   184 KGNSYEFNPTSSESNKDNGDLTGIIDWEALNKASIAA-----TAARWSKCPPLTKNFYKEAP--- 240
            |||.   |....|..|.||:...... |.|:|..:|.     ....:.:.|...|...|:.|
  Fly    26 KGNK---NAQKQEPPKQNGNKPSKKP-EKLSKKHVAKDEDDDLEEDFQEAPLPKKKQQKQPPKKQ 86

  Fly   241 ---------------------------EVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIP 278
                                       |||.:.:.:::...|::::.......||...:.:..:|
  Fly    87 QIQVANSDSESDDDEQEDEADEDSDLDEVAEVDEEDVDSGSEDDDQQEDEDEEEPVPAKKTKLLP 151

  Fly   279 N--------PV-----WTFEQCFA--EYPD----------------MLEEITKMGFSKPSPIQSQ 312
            |        |.     :|.|...|  :|.|                .|..|.:|||::.:.|||:
  Fly   152 NKSKAQNGKPAKDDEPFTVESSLAALDYRDSDDRSFASLKGAVSEATLRAIKEMGFTEMTEIQSK 216

  Fly   313 AWPILLQGHDMIGIAQTGTGKTLAFLLPGM-IHTEYQSTPRGTRGGANVLVLAPTRELALQI--- 373
            :...||:|.|::|.||||:|||||||:|.: :..:.:..|   |.|..|::::|||||::|.
  Fly   217 SLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFMP---RNGTGVIIISPTRELSMQTFGV 278

  Fly   374 --EMEVKKYSFRGMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVID--VSTITYL 434
              |:....:...|:    |.||.||.::...|.:|..|::.|||||.|.:. |..|  ...:..|
  Fly   279 LKELMAHHHHTYGL----VMGGSNRQVESEKLGKGINILVATPGRLLDHLQ-NSPDFLYKNLQCL 338

  Fly   435 VLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKN-PIQVCV-GSLDLA 497
            ::||.||:|::|||.::::::..:...|||::.|||....:..|::..:|: ||.|.| .:.|.|
  Fly   339 IIDEVDRILEIGFEEELKQIINLLPKRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTA 403

  Fly   498 ATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIF---CGRKVRADDLSSELTLDGFMTQCI 559
            ....::|...:...:.......|...||...  |:::|   |.......:|.:.:.|.   ...|
  Fly   404 TVDGLEQGYIVCPSEKRLLVLFTFLKKNRKK--KVMVFFSSCMSVKYHHELFNYIDLP---VTSI 463

  Fly   560 HGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGR-A 623
            ||.:.|..|........:....||:.||||:|||||..:..::.||.|.:..||:||||||.| :
  Fly   464 HGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGS 528

  Fly   624 GRQGTSISFFTREDWAMAKELIEI---LQEAE---QEVPD------------------------- 657
            |..|.::.....|:....:.|...   |.|.|   |::.|
  Fly   529 GTSGHALLLMRPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKS 593

  Fly   658 -------------------ELHNMARRF---------------KAMKDKRAAEGGGFGGRGGRFG 688
                               :|..:|:.|               |..:.::...|||||.. .:..
  Fly   594 YVRAYDSHQLKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAAKRERPEKRVGGGGFGFY-KKMN 657

  Fly   689 GGRGGGRRNFDQ 700
            .|....:|:|.|
  Fly   658 EGSASKQRHFKQ 669

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7878	NP_649767.1	KH-I	92..150	CDD:238053
		DEADc	288..489	CDD:238167	75/227 (33%)
		DEXDc	298..505	CDD:214692	75/216 (35%)
		Helicase_C	514..624	CDD:278689	36/113 (32%)
pit	NP_001287459.1	SrmB	186..677	CDD:223587	135/498 (27%)
		DEADc	187..394	CDD:238167	72/214 (34%)
		HELICc	408..537	CDD:238034	39/133 (29%)
		DUF4217	569..627	CDD:290667	3/57 (5%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451501
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840