DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7878 and ais

DIOPT Version :10

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_649009.1 Gene:ais / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster


Alignment Length:502 Identity:153/502 - (30%)
Similarity:250/502 - (49%) Gaps:56/502 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 SSESNKDNGDLT--GIIDWEALNKASIAATAARWSKCPPLTKNFYKEAPEVANLTKSEIERIREE 256
            |.||:||:.|:|  .::|.::.|:              |..|...||  :..:..:.||::..||
  Fly    45 SEESDKDDEDITEFRLLDGDSSNQ--------------PKRKKPKKE--KTLSPKELEIQKAAEE 93

  Fly   257 NNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQGH 321
            .|:....|..... |:..||..:...|..:.|...|.:.:.:....|..|:|||.||.|:|||..
  Fly    94 ANETRKQYGIRVL-GKNVPPPVDSFGTLTRDFKMLPRLQQNLLSRNFDHPTPIQMQALPVLLQRR 157

  Fly   322 DMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRG----GANVLVLAPTRELALQIEMEVKKYSF 382
            .::..|.||:|||||||.|.:         .|.|.    |...||||||||||.||..|..:.:.
  Fly   158 ALMACAPTGSGKTLAFLTPII---------NGLRAHKTTGLRALVLAPTRELAQQIYRECAELTR 213

  Fly   383 R-GMKAVCVYGGGNRNMQISDLER--GAE------IIICTPGRLNDLIMAN--VIDVSTITYLVL 436
            . |::...:       .::|:.::  |||      |::.||.|:..|:...  ::|:|.:.:.||
  Fly   214 ETGLRTHFI-------SKVSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVL 271

  Fly   437 DEADRMLDMG---FEPQIRKVMLDI-RPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLA 497
            |||||:::.|   |:.|:..:.... .|.:.....|||:...|.:.|..::||.:::.:| :..:
  Fly   272 DEADRLMEEGQNNFKEQLDDIYAACSNPTKCVAFFSATYTVPVAKWALRHLKNLVRITIG-VQNS 335

  Fly   498 ATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGN 562
            ||.:|:|.:..:..:..|...|...|: ......:::|...|.||..|..||..||.....||..
  Fly   336 ATETVQQELLFVGSEGGKLVAIRDLVR-QGLQPPVLVFVQSKERAKQLFEELLYDGINVDVIHAE 399

  Fly   563 RDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQG 627
            |.|..|:..:...:.|.:.:|:.|::..||:|.:.:..|||||||.....|:||:||||||||.|
  Fly   400 RSQHQRDNCVKAFREGSIWVLICTELMGRGIDFKGVNLVINYDFPPTTISYIHRIGRTGRAGRPG 464

  Fly   628 TSISFFTREDWAMAKELIEILQEAEQEVPDELHNMARRFKAMKDKRA 674
            .:|:|||:||.:..:.:..|::.:...||:.:..|.:..|:....||
  Fly   465 RAITFFTQEDTSNLRGIALIIKNSGGTVPEYMLQMKKVRKSEAKMRA 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH_1 92..152 CDD:459630
DEAD-like_helicase_N 174..663 CDD:475120 149/489 (30%)
aisNP_649009.1 SrmB 123..538 CDD:440279 130/407 (32%)
Blue background indicates that the domain is not in the aligned region.

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