DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7878 and ddx5

DIOPT Version :10

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_989229.1 Gene:ddx5 / 394837 XenbaseID:XB-GENE-1009995 Length:609 Species:Xenopus tropicalis


Alignment Length:555 Identity:225/555 - (40%)
Similarity:328/555 - (59%) Gaps:70/555 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 DRDN-RDHGSNERYDGGGYDRYKGNSYEFNPTSSESNKDNGDLTGIIDWEALNKASIAATAARWS 226
            |||. ||.|.      ||..|:.||.   ..||.:.....         |.|.|       .:|:
 Frog     6 DRDRARDRGF------GGGPRFGGNR---GGTSGKYGNPG---------ERLMK-------KKWN 45

  Fly   227 --KCPPLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFA 289
              :.|...||||:|.|:|...|..|.::.| .:.:|||..:..||          ||..|.:  |
 Frog    46 LDELPKFEKNFYQEHPDVVRRTPQECDQYR-RSKEITVRGLNCPK----------PVLQFHE--A 97

  Fly   290 EYP-DMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRG 353
            .:| :::|.:.:..|:.|:|||.|.||:.|.|.||:|:|.||:||||::||||::|..:|  |..
 Frog    98 SFPANLMEVVKRQNFTDPTPIQGQGWPVALSGLDMVGVAMTGSGKTLSYLLPGIVHINHQ--PFL 160

  Fly   354 TRG-GANVLVLAPTRELALQIEMEVKKYSFRG--MKAVCVYGGGNRNMQISDLERGAEIIICTPG 415
            .|| |..:||||||||||.|::....:|. |.  :::.|:|||..:..||.|||||.||.|.|||
 Frog   161 QRGDGPILLVLAPTRELAQQVQQVAAEYG-RACRLRSTCIYGGAPKGPQIRDLERGVEICIATPG 224

  Fly   416 RLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQ 480
            ||.|.:.|...:::..||||||||||||||||||||||::..|||||||:|.|||||..||:||:
 Frog   225 RLIDFLEAGKTNLNRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAE 289

  Fly   481 SYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSS--TDKIIIFCGRKVRAD 543
            .::::.:.:.:|:|:|:|.|::.||:.:..|. :|...:...::.:.|  .:|.|:|...|.|.|
 Frog   290 DFLRDYVHINIGALELSANHNILQIVDVCNDG-EKDEKLVRLMEEIMSEKENKTIVFVETKRRCD 353

  Fly   544 DLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPH 608
            ||:..|..||:....|||::.|.:|:..:.:.|.|...||:||||||||||:||:..|||||:|:
 Frog   354 DLTRRLRRDGWPAMGIHGDKSQQERDWVLNEFKHGKSPILIATDVASRGLDVEDVKFVINYDYPN 418

  Fly   609 NIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMARRFKAMKDKR 673
            :.|:|:||:|||.|:.:.||:.:|||..:.....:||.:|:||.|.:..:|      .:.::|: 
 Frog   419 SSEDYIHRIGRTARSSKTGTAYTFFTPGNIKQVNDLISVLREANQAINPKL------LQLVEDR- 476

  Fly   674 AAEGGGFGGRGG------RFGGGRGGG--RRNFDQ 700
                |.|.||||      ||..|:.||  |.|:|:
 Frog   477 ----GRFRGRGGMNDRRDRFSSGKRGGWDRENYDR 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH_1 92..152 CDD:459630
DEAD-like_helicase_N 174..663 CDD:475120 204/496 (41%)
ddx5NP_989229.1 DEAD-like_helicase_N 33..499 CDD:475120 207/509 (41%)
Blue background indicates that the domain is not in the aligned region.

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