DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7878 and CG10077

DIOPT Version :10

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster


Alignment Length:655 Identity:238/655 - (36%)
Similarity:338/655 - (51%) Gaps:116/655 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 YRAKRNDYGGGRRDNRDNYGAGHRDSRDSAGGGGGDFSESLSIASEMVGKVIGRGGSNISRIQND 119
            |..:.|.:|||                  .|||.|..:..: :.:.|.|...|.|...       
  Fly     4 YNGQMNAFGGG------------------GGGGAGGLAGGM-VPNRMGGGAPGGGPGG------- 42

  Fly   120 FNVRVKLDKCDLIVKITGSIQSNVIDAINHVRKQVTNSGDRGQDRDNRDHGSNERYDGGG----- 179
                            .|..|.|         :.....|..|....|   |...|.:|||     
  Fly    43 ----------------AGMFQRN---------RSAPYPGFNGHGPAN---GGQRRMNGGGPSMGP 79

  Fly   180 -----YDRYKGNSYEFNPTSSESNKDNGDLTGIIDWEALNKASIAATAARWSKCPPLTKNFYKEA 239
                 .|.:.|.:      ..:.:.::|.....|.|..:|             ..|..|||||..
  Fly    80 GGPRNQDGFGGQN------GGQRSSNHGAHLPKIVWSEVN-------------LTPFRKNFYKPC 125

  Fly   240 PEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYPD-MLEEITKMGF 303
            ..|...|..|.|... .:|:||:       :|:   .:|.|...||:  ..:|| ::.||.|.||
  Fly   126 DSVLARTVGETETFL-TSNEITI-------KGD---QVPTPSIEFEE--GGFPDYVMNEIRKQGF 177

  Fly   304 SKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRG-GANVLVLAPTR 367
            :||:.||:|.|||.:.|.|::|:||||:|||||::||.::|...|  ||..|| |...|||||||
  Fly   178 AKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQ--PRLERGDGPIALVLAPTR 240

  Fly   368 ELALQIEMEVKKY-SFRGMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTI 431
            |||.||:....:: |...::..|::||..:..|..|||||.||:|.|||||.|.:......:...
  Fly   241 ELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRC 305

  Fly   432 TYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDL 496
            ||||||||||||||||||||||:|..||||||.:|.|||||..||:||:.::.|.|||.:|||.|
  Fly   306 TYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSL 370

  Fly   497 AATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTD--KIIIFCGRKVRADDLSSELTLDGFMTQCI 559
            :|.|::.||:.:. |:.:|...:...:.::|:.:  |.|||...|.|.|:::..::..|:....|
  Fly   371 SANHNILQIVDVC-DENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAI 434

  Fly   560 HGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAG 624
            ||::.|.:|:..::..::|...||||||||:||||::|:..|||||:|.|.|:||||:|||||:.
  Fly   435 HGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSN 499

  Fly   625 RQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMARRFKAMKDKRAAEGGGFGGRGGRFGG 689
            ..||:.:.||..:...|.:||::|:||.|.:..:|.|||.            .||:..|||..||
  Fly   500 NTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMAM------------NGGYNKRGGGMGG 552

  Fly   690 GRGGG 694
            |..||
  Fly   553 GYRGG 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH_1 92..152 CDD:459630 7/59 (12%)
DEAD-like_helicase_N 174..663 CDD:475120 206/503 (41%)
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 215/553 (39%)

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