DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7878 and me31B

DIOPT Version :10

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster


Alignment Length:397 Identity:127/397 - (31%)
Similarity:211/397 - (53%) Gaps:34/397 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 KSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYPDMLEEITKMGFSKPSPIQS 311
            ||:: ::..::|:...:.|.:.:..|           ||: |....::|..|.:.|:.:|||||.
  Fly    35 KSKL-KLPPKDNRFKTTDVTDTRGNE-----------FEE-FCLKRELLMGIFEKGWERPSPIQE 86

  Fly   312 QAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRGGANVLVLAPTRELAL---QI 373
            .|.||.|.|.|::..|:.|||||.|:.:|.:    .|..|  |:.....||:.|||||||   ||
  Fly    87 AAIPIALSGKDVLARAKNGTGKTGAYCIPVL----EQIDP--TKDYIQALVMVPTRELALQTSQI 145

  Fly   374 EMEVKKYSFRGMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDE 438
            .:|:.|:  ..::.:...||......|..:.:..::||.||||:.||:...|.|:|....|||||
  Fly   146 CIELAKH--LDIRVMVTTGGTILKDDILRIYQKVQLIIATPGRILDLMDKKVADMSHCRILVLDE 208

  Fly   439 ADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVK 503
            ||::|.:.|:..:..|:|.:..|.|.::.|||:|..|:...:.:::.|.:  :..::......|.
  Fly   209 ADKLLSLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYE--INLMEELTLKGVT 271

  Fly   504 QIIKLMED--DMDKFNTITSFVK-NMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQ 565
            |....:::  .:...||:.|.:: |.|     ||||....|.:.|:.::|..|:....||....|
  Fly   272 QYYAFVQERQKVHCLNTLFSKLQINQS-----IIFCNSTQRVELLAKKITELGYCCYYIHAKMAQ 331

  Fly   566 MDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSI 630
            ..|.:...|.:.|:.|.||.:|:.:||:|::.:..|||:|||...|.|:||:||:||.|..|.:|
  Fly   332 AHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAI 396

  Fly   631 SFFTRED 637
            :..|.||
  Fly   397 NLITYED 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH_1 92..152 CDD:459630
DEAD-like_helicase_N 174..663 CDD:475120 127/397 (32%)
me31BNP_523533.2 PRK04537 50..>454 CDD:235307 124/381 (33%)
DEADc_DDX6 60..260 CDD:350698 74/210 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.