DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7878 and me31B

DIOPT Version :9

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster


Alignment Length:397 Identity:127/397 - (31%)
Similarity:211/397 - (53%) Gaps:34/397 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 KSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYPDMLEEITKMGFSKPSPIQS 311
            ||:: ::..::|:...:.|.:.:..|           ||: |....::|..|.:.|:.:|||||.
  Fly    35 KSKL-KLPPKDNRFKTTDVTDTRGNE-----------FEE-FCLKRELLMGIFEKGWERPSPIQE 86

  Fly   312 QAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRGGANVLVLAPTRELAL---QI 373
            .|.||.|.|.|::..|:.|||||.|:.:|.:    .|..|  |:.....||:.|||||||   ||
  Fly    87 AAIPIALSGKDVLARAKNGTGKTGAYCIPVL----EQIDP--TKDYIQALVMVPTRELALQTSQI 145

  Fly   374 EMEVKKYSFRGMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDE 438
            .:|:.|:  ..::.:...||......|..:.:..::||.||||:.||:...|.|:|....|||||
  Fly   146 CIELAKH--LDIRVMVTTGGTILKDDILRIYQKVQLIIATPGRILDLMDKKVADMSHCRILVLDE 208

  Fly   439 ADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVK 503
            ||::|.:.|:..:..|:|.:..|.|.::.|||:|..|:...:.:::.|.:  :..::......|.
  Fly   209 ADKLLSLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYE--INLMEELTLKGVT 271

  Fly   504 QIIKLMED--DMDKFNTITSFVK-NMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQ 565
            |....:::  .:...||:.|.:: |.|     ||||....|.:.|:.::|..|:....||....|
  Fly   272 QYYAFVQERQKVHCLNTLFSKLQINQS-----IIFCNSTQRVELLAKKITELGYCCYYIHAKMAQ 331

  Fly   566 MDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSI 630
            ..|.:...|.:.|:.|.||.:|:.:||:|::.:..|||:|||...|.|:||:||:||.|..|.:|
  Fly   332 AHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAI 396

  Fly   631 SFFTRED 637
            :..|.||
  Fly   397 NLITYED 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH-I 92..150 CDD:238053
DEADc 288..489 CDD:238167 72/203 (35%)
DEXDc 298..505 CDD:214692 71/209 (34%)
Helicase_C 514..624 CDD:278689 40/110 (36%)
me31BNP_523533.2 PTZ00424 60..422 CDD:185609 122/360 (34%)
DEADc 60..260 CDD:238167 74/210 (35%)
HELICc 270..398 CDD:238034 45/132 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451482
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.