DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7878 and Dbp80

DIOPT Version :9

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster


Alignment Length:421 Identity:126/421 - (29%)
Similarity:207/421 - (49%) Gaps:50/421 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 ETSPPIP-NPVWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQG--HDMIGIAQTGTGK 333
            :.:|..| :.|.|||....: ..:|:.|..|||:.||.||..|.|.||..  .:||..:|:||||
  Fly    62 QKNPNSPLHSVKTFEALHLK-ASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGK 125

  Fly   334 TLAFLLPGMIHTEYQSTPRGTRGGANVLVLAPTRELALQIE----------MEVK-KYSFRGMKA 387
            |.||:|..:      |..........||.|:||.|||:|..          .|:| :::.||.:.
  Fly   126 TAAFVLAML------SRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEV 184

  Fly   388 VCVYGGGNRNMQISDLERGAEIIICTPGRLNDL-IMANVIDVSTITYLVLDEADRML-DMGFEPQ 450
                   :|:.:|.:     .|:|.|||:|.|. |...:.|:..|:..||||||.|: ..|...|
  Fly   185 -------DRSKKIEE-----HILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQ 237

  Fly   451 IRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDK 515
            ..::...:.|..|.:..|||:...|...|:..:.:|..:.: ..:..:..::||.....:::..|
  Fly   238 CIRIHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRL-MREEESLENIKQYYVKCKNEEGK 301

  Fly   516 FNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVV 580
            :|.|.: :....|..:.||||..|..|..|::::|.||.....:.|:...:.|...:...:||:.
  Fly   302 YNAIQN-IYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLE 365

  Fly   581 RILVATDVASRGLDIEDITHVINYDFPHNI------EEYVHRVGRTGR----AGRQGTSISFFTR 635
            ::|:.|::.|||:|||.:|.|:|:|.|.::      |.|:||:|||||    |..:.:.|.....
  Fly   366 KVLITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGRFEPSALTRNSPIFGVKA 430

  Fly   636 EDWAMAKELIEILQEAE---QEVPDELHNMA 663
            |...:.||:......||   :|:|.|..|::
  Fly   431 ESGKIGKEINRSSSGAESGSREMPKEKENIS 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH-I 92..150 CDD:238053
DEADc 288..489 CDD:238167 67/215 (31%)
DEXDc 298..505 CDD:214692 67/221 (30%)
Helicase_C 514..624 CDD:278689 40/119 (34%)
Dbp80NP_001263168.1 DEADc 75..277 CDD:238167 69/220 (31%)
DEXDc 88..291 CDD:214692 67/221 (30%)
Helicase_C 299..414 CDD:278689 39/115 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451479
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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