DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7878 and Dbp21E2

DIOPT Version :9

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_608544.1 Gene:Dbp21E2 / 33254 FlyBaseID:FBgn0086130 Length:536 Species:Drosophila melanogaster


Alignment Length:412 Identity:116/412 - (28%)
Similarity:195/412 - (47%) Gaps:56/412 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 YPDMLEEI-TKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGM-------IHTEY 347
            :|.:||.: .::|....:.||.|..|::......:..|:||.|||:.:|||.:       :.||.
  Fly   116 HPQLLENLRVELGIKLLTGIQKQGMPVVHGNEHCLIAAETGCGKTITYLLPIVDKLLQKEVVTER 180

  Fly   348 Q-STPRGTRGGANVLVLAPTRELALQIEMEVKKYSFRG--MKAVCVYGGGNRNMQISDLERGAEI 409
            : :|||       ||:|.|.||||.||....:|.: :|  :|...:.||..:.:.::......:|
  Fly   181 KLNTPR-------VLILTPGRELATQIAGVTEKLT-QGTNLKVQSLLGGNTKQLMMNPQFEEVDI 237

  Fly   410 IICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVM------LDIRPD--RQTIM 466
            ::.|.|.|:.|:...:..:..:.:|||||||.:||..|..::...:      |..:.|  .|.|:
  Fly   238 LVATLGALSKLVTTGIYRMEQVRHLVLDEADTLLDDTFTDKLSYFLRRFPFHLVQKEDAGTQMIL 302

  Fly   467 TSATWPPGVRRLAQSYMK-NPIQVCVG-SLDLAATHSVKQIIKLMEDDMDKFNTITSFVK-NMSS 528
            .|||.|...|.:....:. :.|:..|. .|....:|..::.::|.:  .|:..|:.|.|| :::.
  Fly   303 ASATMPTNTREILHKVIDVDTIREVVSP
HLHRLMSHVTQKFLRLSK--ADRPATLLSLVKHDLAK 365

  Fly   529 TDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDR------EQAIADIKSGVVRILVATD 587
            ...:|:|..:...:|.:|..|...|  ..|::.|.|.:.:      ||    .::|...:|..||
  Fly   366 RRPLIVFSNKSTTSDFVSIFLNNSG--VNCLNLNGDMLMKIRLGRFEQ----FQNGHCDVLSTTD 424

  Fly   588 VASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAE 652
            |.|||||.....||:|:|||.::.:|:||.||.||.|..          |.|:...||.  ...|
  Fly   425 VGSRGLDTTRARHVVNFDFPLHVSDYIHRCGRIGRVGNM----------DKALVTNLIS--SRRE 477

  Fly   653 QEVPDELHNMARRFKAMKDKRA 674
            .:|...:.:.||....:.|..|
  Fly   478 IDVVQRIEHAARTGGLLPDVNA 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH-I 92..150 CDD:238053
DEADc 288..489 CDD:238167 62/217 (29%)
DEXDc 298..505 CDD:214692 62/227 (27%)
Helicase_C 514..624 CDD:278689 39/116 (34%)
Dbp21E2NP_608544.1 P-loop_NTPase 113..314 CDD:304359 61/205 (30%)
DEXDc 126..330 CDD:214692 60/211 (28%)
HELICc 343..462 CDD:238034 40/126 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451486
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.