DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7878 and CG32344

DIOPT Version :9

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster


Alignment Length:373 Identity:118/373 - (31%)
Similarity:204/373 - (54%) Gaps:17/373 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 DMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRGG 357
            ::::.|||.|:..|:|||.:..|::|:|.|::.:|:||:|||..||:|  :..:.|.  |....|
  Fly    49 ELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIP--LFEKLQR--REPTKG 109

  Fly   358 ANVLVLAPTRELALQIEMEVKKYS-FRGMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLI 421
            |..|:|:||||||:|....:|:.. |..:|::.|.||.:.:.|.|.:....::|:.||||...|.
  Fly   110 ARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLC 174

  Fly   422 MANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNP 486
            :...:.:::|.|:|.|||||:.:|||..|:.:.:..:...|||:|.|||.|..:...|::.:.:|
  Fly   175 VEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMFSATLPKLLVEFARAGLNDP 239

  Fly   487 IQVCVGSLDLAATHSVKQIIKLM--EDDMDKFNTITSFVKNMSST-DKIIIFCGRKVRADDLSSE 548
            :.:   .||:.:.......:|.:  ..| |::..:...:|.:... .:.::|.|.:...:.:|..
  Fly   240 VLI---R
LDVESKLPDALALKFLYCRPD-DRYTALVVLLKYVIPVQSQTVVFAGTQHHVELISYI 300

  Fly   549 LTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEY 613
            ||..|.....::.:.|...|:...|...:..|.:|:.||||:||:||..:..|:|..||...:.:
  Fly   301 LTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLF 365

  Fly   614 VHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHN 661
            ||||||..||||.||:.|..:.:|.|...:|...|..     |..:|:
  Fly   366 VHRVGRCARAGRTGTAYSIVSTDDTAHLLDLHLFLNR-----PFNIHD 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH-I 92..150 CDD:238053
DEADc 288..489 CDD:238167 70/196 (36%)
DEXDc 298..505 CDD:214692 72/207 (35%)
Helicase_C 514..624 CDD:278689 32/110 (29%)
CG32344NP_612028.4 DEADc 41..243 CDD:238167 70/200 (35%)
DEXDc 54..243 CDD:214692 70/195 (36%)
HELICc 263..384 CDD:238034 38/121 (31%)
DBP10CT 666..721 CDD:285373
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451485
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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