DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7878 and CG6227

DIOPT Version :9

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_573020.2 Gene:CG6227 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster


Alignment Length:520 Identity:207/520 - (39%)
Similarity:312/520 - (60%) Gaps:36/520 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 KGNSYEFNPTSSESNKDNGDLTGIIDWEALN--------KASIAATAARWSKCPPLTKNFYKEAP 240
            ||...|.|..|.|.:.:: :|..|.| .|:|        .|.|..::..::   |..||||.|.|
  Fly   419 KGEVIEQNMDSLEYSSED-ELEDIRD-TAVNLAMKHRKELAKIDHSSVTYA---PFRKNFYVEVP 478

  Fly   241 EVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYPDMLEEITKMGFSK 305
            |:..:|.:::|:.|.:...|.|.          ....|.|:.|:.||.....:| |.:.::||.|
  Fly   479 ELTRMTAADVEKYRSDLEGIQVK----------GKGCPKPIKTWAQCGVSKKEM-EVLRRLGFEK 532

  Fly   306 PSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIH-TEYQSTPRGTRGGANVLVLAPTREL 369
            |:|||.||.|.::.|.|:||||:||:||||||:||...| .:..|...|  .||..:::||||||
  Fly   533 PTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDG--DGAIAIIMAPTREL 595

  Fly   370 ALQIEMEVKKYS-FRGMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMAN---VIDVST 430
            .:||..:::|:| ..|::.||||||...:.||::|:||||||:|||||:.|::.||   |.::..
  Fly   596 CMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 660

  Fly   431 ITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLD 495
            :||:||||||||.|||||||:.:::.::||||||:|.|||:|..:..||:..:|.||:|.||...
  Fly   661 VTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRS 725

  Fly   496 LAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIH 560
            :.. ..|:|.:.::.||. ||..:...:........||:|..::..||.|..:|....:....:|
  Fly   726 VVC-KEVEQHVVILNDDA-KFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLH 788

  Fly   561 GNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGR 625
            |..||.||:..|.|.|||.||:|:||.||:||||::|:..|:|||.|::.|:||||.|||||||:
  Fly   789 GGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGK 853

  Fly   626 QGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMARRFKAMKD---KRAAEGGGFGGRGGRF 687
            :|::.:|.|.|....|.::|..:..:...:|.||..:...:||:::   |....||||.|:|.:|
  Fly   854 KGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKF 918

  Fly   688  687
              Fly   919  918

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH-I 92..150 CDD:238053
DEADc 288..489 CDD:238167 101/205 (49%)
DEXDc 298..505 CDD:214692 103/211 (49%)
Helicase_C 514..624 CDD:278689 47/109 (43%)
CG6227NP_573020.2 SrmB 482..967 CDD:223587 186/452 (41%)
DEADc 516..719 CDD:238167 101/205 (49%)
HELICc 733..860 CDD:238034 53/127 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451453
Domainoid 1 1.000 152 1.000 Domainoid score I185
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9750
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.