DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7878 and ddx5

DIOPT Version :10

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_997777.2 Gene:ddx5 / 322206 ZFINID:ZDB-GENE-030131-925 Length:617 Species:Danio rerio


Alignment Length:540 Identity:227/540 - (42%)
Similarity:318/540 - (58%) Gaps:56/540 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 DRD-NRDHGSNERYDGGGYDRYKGNSYEFNPTSSESNKDNGDLTGIIDWEALNKASIAATAARWS 226
            ||| .||.||   |..|. .|:.|:  ...|..::...:.||......|..             .
Zfish     6 DRDRGRDRGS---YSSGP-PRFGGS--RNGPPPAKKFGNPGDRLRKKHWNL-------------D 51

  Fly   227 KCPPLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQC-FAE 290
            :.|...||||:|.|:||..:..|:|..| .:.:|||    :.::|      |.|:..|.:. |.:
Zfish    52 ELPKFEKNFYQENPDVARRSAQEVEHYR-RSKEITV----KGRDG------PKPIVKFHEANFPK 105

  Fly   291 YPDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTR 355
            |  :::.|||..::.|:|||:|.||:.|.|.||:||||||:||||::|||.::|..:|  |....
Zfish   106 Y--VMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQ--PFLEH 166

  Fly   356 G-GANVLVLAPTRELALQIEMEVKKYSFRG-MKAVCVYGGGNRNMQISDLERGAEIIICTPGRLN 418
            | |...||||||||||.|::....:|.... :|:.|:|||..:..||.|||||.||.|.|||||.
Zfish   167 GDGPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLI 231

  Fly   419 DLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYM 483
            |.:.|...::...||||||||||||||||||||||::..|||||||:|.|||||..||:||:.::
Zfish   232 DFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFL 296

  Fly   484 KNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTD-KIIIFCGRKVRADDLSS 547
            |..||:.||:|.|:|.|::.||:.:..|...:...|....:.||..: |.|||...|.|.|||:.
Zfish   297 KEYIQINVGALQLSANHNILQIVDVCNDGEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDDLTR 361

  Fly   548 ELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEE 612
            .:..||:....|||:::|.:|:..:.:.|.|...||:||||||||||:||:..|||:|:|:|.|:
Zfish   362 RMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNNSED 426

  Fly   613 YVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMARRFKAMKDKRAAEG 677
            |:||:|||.|:.:.||:.:|||..:...|.:|:.:|:||.|.:..:|..||.             
Zfish   427 YIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQMAE------------- 478

  Fly   678 GGFGGRGGRFGGGRGGGRRN 697
                .||||..||||||.|:
Zfish   479 ----DRGGRSRGGRGGGYRD 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH_1 92..152 CDD:459630
DEAD-like_helicase_N 174..663 CDD:475120 207/492 (42%)
ddx5NP_997777.2 DEAD-like_helicase_N 3..477 CDD:475120 214/504 (42%)
Blue background indicates that the domain is not in the aligned region.

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