DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7878 and CG14443

DIOPT Version :10

Sequence 1:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster


Alignment Length:738 Identity:175/738 - (23%)
Similarity:297/738 - (40%) Gaps:192/738 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EYSKPNNKYERSIRRDGNSRAYKGDRN--DYGGEGRGYRAKRNDYGGGRRDNRDNYGAGH-RDSR 81
            |..|||.|    ||    |.::.|..:  .:....|..|:|....|.|:     ..|..| |.|.
  Fly    75 EGQKPNFK----IR----SESFSGPHSAGGFSKSTRESRSKSRSMGNGK-----FRGKSHLRSSS 126

  Fly    82 DSAGGGGGDFSESLSIASEMVGKVIGRGGSNISRIQNDFNVRVKLDKCDLIVKITGSIQSNVIDA 146
            :||...|.:.|.|.|                                                  
  Fly   127 ESAHSSGSESSSSDS-------------------------------------------------- 141

  Fly   147 INHVRKQVTNSGDRGQDRDNRDHGSNERYDGGGYDRYKG------------NSYEFNPTSSES-- 197
                     |||. ..|.|:....|:...|.|...|.:.            ||::...||.|:  
  Fly   142 ---------NSGS-SSDSDSTTGSSSHGSDTGERPRMRSAVFRIHETWQSPNSFKAVKTSRENKE 196

  Fly   198 ---------------NKDNGDLT------------GIIDW------------------EALNKAS 217
                           :|...|||            |...|                  .::.|..
  Fly   197 SRSRSSSLPQKRFCPSKTQNDLTYGSPEPKSPSNRGRNSWRVGMRTPWKKSQSRSMSCSSIQKIL 261

  Fly   218 IAATAARWSKCPPLTKNFYKE------APEVANLTKSEIERI-------REENNKITVSYVFEPK 269
            ::.:..| |:.|......|::      .|...|..|..::.:       |:.:|....|:     
  Fly   262 VSRSFTR-SRSPHRNTLCYQDQSKNPSRPSNYNTWKQPMDEVYNNAANYRKRHNITLTSW----- 320

  Fly   270 EGETSPPIPNPVWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKT 334
               ....:|.||.:||:. .....:|:::...|:..|:|||:|.|.|..:|.:::.|:..|||||
  Fly   321 ---NMRNLPEPVLSFERS-GFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKT 381

  Fly   335 LAFLLPGMIHTEYQSTPRGTRGGANVLVLAPTRELALQIEMEVKKYSF-RGMKAVCVYGGGNRNM 398
            |.:||||::....|......:.|..||:|...||.|:.::.||..|:. ..::..|:.|.     
  Fly   382 LGYLLPGIMKMHNQRGLMQHKKGPIVLILVDCREAAVMVQREVLYYTNPLELRTHCLLGN----- 441

  Fly   399 QISDLERGAE--IIICTPGRLNDLI--MANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIR 459
              |..:..||  :::.:.|||..:|  ..:|:::...||||||..|||:|:|.|..|.:::..:|
  Fly   442 --SQWQGHAECDLLVASAGRLLQMIDNKKHVVELERCTYLVLDNIDRMIDVGLEGNICRLLCRLR 504

  Fly   460 PDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLD------------LAATHSVKQIIKLMEDD 512
            |..|.|::|.:|...::|:|..::.....:.||.::            :...:.:.::.:||:: 
  Fly   505 PHAQLIVSSTSWSSNLKRMANKFLGQYTAIRVGEINNIGVRLQNIRQRVEVVNGLSKVERLMKE- 568

  Fly   513 MDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKS 577
                  :|:.........|::|:..|:...::| .:|..:....:.|||.|...:.:..|.|..:
  Fly   569 ------LTAIYDTSDIPGKVVIYVKRQKVVEEL-VDLIRNCVPCEGIHGGRTAQENQGIIHDFGT 626

  Fly   578 GVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTG--RAGRQGTSISFFTREDWAM 640
            |...|:|||.:.|..||:..|.:|||||||.||::||.|:.|||  ...|....|||||..::.:
  Fly   627 GAYNIIVATQMTSNCLDVPGIRYVINYDFPDNIDKYVQRMSRTGCLSYNRNCEVISFFTMANYKL 691

  Fly   641 AKELIEILQEAEQEVPDELHNMA 663
            ..|:::.|:..:||:...|..:|
  Fly   692 VTEVVDFLKICKQEIGPHLLQLA 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7878NP_649767.1 KH_1 92..152 CDD:459630 3/59 (5%)
DEAD-like_helicase_N 174..663 CDD:475120 144/579 (25%)
CG14443NP_572330.2 DEAD-like_helicase_N <310..720 CDD:475120 123/429 (29%)

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