Protein Alignment CG7878 and sum3

DIOPT Version :10

• Sequence 1: NP_649767.1
• Gene: CG7878 / 40959
• FlyBaseID: FBgn0037549
• Length: 703
• Species: Drosophila melanogaster
• Sequence 2: NP_588033.1
• Gene: sum3 / 2538689
• PomBaseID: SPCC1795.11
• Length: 636
• Species: Schizosaccharomyces pombe
• Alignment Length: 723
• Identity: 221/723 - (30%)
• Similarity: 326/723 - (45%)
• Gaps: 196/723 - (27%)

  Fly     7 DDPNYVEKPAVHQEYSKPNNKYERSIRRDGNSRAYKGDRNDY-------GGEGRGYRAKRNDYGG 64
            |.|:....|||..:.|..:....||......|..| |.|.:|       |||||     :|:|.|
pombe    37 DKPSAGAAPAVGDDESVSSRGSSRSQTPSEFSSNY-GGRREYNRGGHYGGGEGR-----QNNYRG 95

  Fly    65 GRRDNRDNYGAGHRDSRDSAGGGGGDFSESLSIASEMVGKVIGRGGSNISRIQNDFNVRVKLDKC 129
            ||.....| |.|:|::|     |.|.:                |.|.::...:|..
pombe    96 GREGGYSN-GGGYRNNR-----GFGQW----------------RDGQHVIGARNTL--------- 129

  Fly   130 DLIVKITGSIQSNVIDAINHVRKQVTNSGDRGQDRDNRDHGSNERYDGGGYDRYKGNSYEFNPTS 194
                     ::..:..|:....|..|                     |..:::|.....|.:
pombe   130 ---------LERQLFGAVADGTKVST---------------------GINFEKYDDIPVEVS--- 161

  Fly   195 SESNKDNGDLTGIIDWEALNKASIAATAARWSKCPPLTKNFYKEAPEVANLTKSEIERIREENNK 259
                  .||:
pombe   162 ------GGDI------------------------------------------------------- 165

  Fly   260 ITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQGHDMI 324
                   ||....||||:.:             .:|:.|...|:::|:|:|..:.||:..|.|::
pombe   166 -------EPVNEFTSPPLNS-------------HLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLM 210

  Fly   325 GIAQTGTGKTLAFLLPGMIHTEYQSTP-------------RGTRGGANVLVLAPTRELALQIEME 376
            ..||||:|||..||.| ::...:...|             |..:.....|:|||||||..||..|
pombe   211 ACAQTGSGKTAGFLFP-ILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEE 274

  Fly   377 VKKYSFRGMKAVC-VYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEAD 440
            .:|:.:|.....| ||||.:...||..:::|.:::..|||||.|||....|.::.|.:|||||||
pombe   275 SRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEAD 339

  Fly   441 RMLDMGFEPQIRKV-----MLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATH 500
            ||||||||||||.:     |..:. :|||:|.|||:|..::.||:.::|:.:.:.||.:...:.:
pombe   340 RMLDMGFEPQIRHIVEGADMTSVE-ERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSEN 403

  Fly   501 SVKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQ 565
            ..::::.:  :|.:|.:.:...:..:......:||...|..||.|:..|....|....|||:|.|
pombe   404 ITQKVVHV--EDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQ 466

  Fly   566 MDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSI 630
            .:||:|:...:||...|:|||.||||||||.::|||||||.|.:|::||||:|||||||..|.::
pombe   467 RERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAV 531

  Fly   631 SFFTREDWAMAKELIEILQEAEQEVPDELHNMARRFKAMKDKRAAEGGGFGGRGGRFG--GGRGG 693
            :||.|.:..:||||||:||||.||.|..|..|||        .::.||  .|||||:.  |||||
pombe   532 AFFNRNNKGIAKELIELLQEANQECPSFLIAMAR--------ESSFGG--NGRGGRYSGRGGRGG 586

  Fly   694 ---GRRNF 698
               |.|:|
pombe   587 NAYGARDF 594

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7878	NP_649767.1	KH_1	92..152	CDD:459630	4/59 (7%)
		DEAD-like_helicase_N	174..663	CDD:475120	167/507 (33%)
sum3	NP_588033.1	SrmB	171..550	CDD:440279	152/395 (38%)