DRSC/TRiP Functional Genomics Resources

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Protein Alignment puc and LSF2

DIOPT Version :10

Sequence 1:NP_524273.1 Gene:puc / 40958 FlyBaseID:FBgn0243512 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_566383.1 Gene:LSF2 / 820265 AraportID:AT3G10940 Length:282 Species:Arabidopsis thaliana


Alignment Length:294 Identity:64/294 - (21%)
Similarity:106/294 - (36%) Gaps:80/294 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LFMPIQNTNNNNR----IGANQKDYPNKRSRENLA---C-----DEVTSTTSSSTAMNGGGRTPA 116
            :|...:.|..|.:    ...|:|...:.|...|||   |     :..|:..|.|:.........|
plant    10 IFSVARYTRENEKSSCFTSINKKSSLDLRFPRNLAGVSCKFSGENPGTNGVSLSSKNKMEDYNTA 74

  Fly   117 LTRSCSSPAVYD---------------IETHPASPV-FPHL--------LLGNGRDAD------D 151
            :.|...||..|.               :.:.|..|. ..||        :|...:|.|      |
plant    75 MKRLMRSPYEYHHDLGMNYTLIRDELIVGSQPQKPEDIDHLKQEQNVAYILNLQQDKDIEYWGID 139

  Fly   152 PSSVGANCVLNVTCQSPNESHLQGLKYMQIPASDTPHQNIKQYFQEAYDFIEDARKTG-SRVLLH 215
            ..|:...|           ..| |:::|:.||.|....:::....:|...:|.|...| .||.:|
plant   140 LDSIVRRC-----------KEL-GIRHMRRPAKDFDPLSLRSQLPKAVSSLEWAVSEGKGRVYVH 192

  Fly   216 CHAGISRSATIAIAYVMRYKSLSLLEAYKLVKVARPIISPNLNFMGQLLELEQNLRKSGVLAPAT 280
            |.||:.|:..::|||:..:..::|..||..:...|| ..||                .|.:..||
plant   193 CSAGLGRAPGVSIAYMYWFCDMNLNTAYDTLVSKRP-CGPN----------------KGAIRGAT 240

  Fly   281 PHL--NSP------SNPSSSSVGLSTQSSQLVEQ 306
            ..|  |.|      |.|.::...::....:|:::
plant   241 YDLAKNDPWKEPFESLPENAFEDIADWERKLIQE 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pucNP_524273.1 PTP_DSP_cys 135..281 CDD:475123 38/161 (24%)
LSF2NP_566383.1 DSP_laforin-like 91..238 CDD:350375 38/175 (22%)

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