DRSC/TRiP Functional Genomics Resources

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Protein Alignment puc and ssh2b

DIOPT Version :10

Sequence 1:NP_524273.1 Gene:puc / 40958 FlyBaseID:FBgn0243512 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_009293925.1 Gene:ssh2b / 557912 ZFINID:ZDB-GENE-081205-4 Length:1179 Species:Danio rerio


Alignment Length:360 Identity:94/360 - (26%)
Similarity:150/360 - (41%) Gaps:68/360 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 VFPHLLLG---NGRDADDPSSVGANCVLNVTCQSPNESHLQGL-KYMQIPASDTPHQNIKQYFQE 197
            :|.|:.||   |..:.::..:.|...:||||.:..|  ...|| :|..|...|....::..|:.:
Zfish   329 IFEHVYLGSEWNASNLEELQNTGVQYILNVTREIDN--FFPGLFEYHNIRVYDEEATDLLAYWND 391

  Fly   198 AYDFIEDARKTGSRVLLHCHAGISRSATIAIAYVMRYKSLSLLEAYKLVKVARPIISPNLNFMGQ 262
            .|.||..|:|.|::.|:||..|:||||:..|||.|:.....:.:|::.||..|.:..||.:||.|
Zfish   392 TYKFISRAKKAGAKCLVHCKMGVSRSASTVIAYAMKEYGWDMEQAFEYVKERRAVTKPNPSFMRQ 456

  Fly   263 LLELEQNLRKSGVLAPATPHLNSPSNPSSSSVGLSTQSSQLVEQPEEEEKREQRER-GKSKSDSE 326
            |:|.:      |:|.        .|....:.:..|...|.|.|:.|...|....:. |:|.|.::
Zfish   457 LVEYQ------GILI--------ASKQRHNKLWRSHSDSDLSERLEPLCKATAAQSLGRSSSRNQ 507

  Fly   327 AMDEDGFDYDD----VDSGSGSLAGSNCSSRLTSPPITPD--------------DEAPSTSA--- 370
            ...:......:    :...|.:..|||       .|:.|:              .||..|.:   
Zfish   508 TFGQTSPSIQELLQTLTPSSATATGSN-------RPVEPNTTRWSDSHIHNGTLHEATETLSFPR 565

  Fly   371 --AASSVSELDSPSSTSSSSGICSLLQSTSSSVSP-RAISKPNLLSPTRQLALFKRNSPAKLRLD 432
              ||:.|.|. .|..||         .:.:.:||| |....|.:|.|.....|.. ::.||..|.
Zfish   566 PRAATVVPEA-RPDITS---------VTVTETVSPGRPHPPPAVLHPPSSPKLLS-DAKAKQGLP 619

  Fly   433 LESSYAP---ASPIPNTMPWLSVPSTPVCEEAPDS 464
            ..|:..|   :||..::...:..|..  |.:|.||
Zfish   620 EVSNLVPLEKSSPKVHSSVNIRTPEP--CTQALDS 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pucNP_524273.1 PTP_DSP_cys 135..281 CDD:475123 48/147 (33%)
ssh2bXP_009293925.1 SSH-N 38..254 CDD:212166
DEK_C 262..320 CDD:462592
DSP_slingshot_2 323..466 CDD:350417 48/152 (32%)
Blue background indicates that the domain is not in the aligned region.

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