DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment puc and dusp4

DIOPT Version :9

Sequence 1:NP_524273.1 Gene:puc / 40958 FlyBaseID:FBgn0243512 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001016109.1 Gene:dusp4 / 548863 XenbaseID:XB-GENE-1007215 Length:388 Species:Xenopus tropicalis


Alignment Length:373 Identity:102/373 - (27%)
Similarity:154/373 - (41%) Gaps:96/373 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DGDGDSVSHIQSEMKMRI-------------KREAPCLLLFMPIQNTNNNNRIGANQKDYPNKRS 89
            :|:.:.:|.::|.:...|             :.::...|:...::...::..|...:..|....|
 Frog    88 EGEEEVLSRLRSGLYSAIIVYDERSPRADALREDSTVYLVVQALRRDTDSTDICLLKGGYERFHS 152

  Fly    90 RENLACDEVTSTTSSSTAMN----GGGRTPALTRSCSSPAVYDIETHPASPVFPHLLLGNG---- 146
            .....|.:..|..|.|...:    |.|     ..||::| ::| :..|.. :.|.|.||:.    
 Frog   153 EYPEFCAKTKSINSISLPASIEPAGIG-----CSSCTTP-LHD-QGGPVE-ILPFLYLGSAYHAA 209

  Fly   147 -RDADDPSSVGANCVLNVTCQSPNESHLQG-LKYMQIPASDTPHQNIKQYFQEAYDFIEDARKTG 209
             ||..|...:.|  ::||:...||  |.:| .:|..||..|....:|..:|.||.::|:..:...
 Frog   210 RRDMLDALRITA--LMNVSADCPN--HFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDSVKDQN 270

  Fly   210 SRVLLHCHAGISRSATIAIAYVMRYKSLSLLEAYKLVKVARPIISPNLNFMGQLLELEQNLRKSG 274
            .|||:||.|||||||||.:||:|..|.:.|.||::.||..|.|||||.:||||||:.|     |.
 Frog   271 GRVLVHCQAGISRSATICLAYLMMTKRVKLEEAFEFVKQRRSIISPNFSFMGQLLQFE-----SQ 330

  Fly   275 VLAPATPHLNSPSNPSSSSVGLSTQSSQLVEQPEEEEKREQRERGKSKSDSEAMDEDGFDYDDVD 339
            ||  .|......::||::                      .|||.|..|                
 Frog   331 VL--TTTCATEAASPSAT----------------------LRERSKPSS---------------- 355

  Fly   340 SGSGSLAGSNCSSRLTSPPITPDDEAPSTSAAASSVSELDSPSSTSSS 387
                            ||..|.....|.:.|..||:..|.||.:||.|
 Frog   356 ----------------SPTSTFVFSFPVSVAGPSSLPYLHSPITTSPS 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pucNP_524273.1 DSPc 133..267 CDD:238073 59/139 (42%)
CDC14 <193..272 CDD:225297 40/78 (51%)
dusp4NP_001016109.1 DSP_MapKP 9..158 CDD:238723 8/69 (12%)
DSP_DUSP4 193..333 CDD:350488 63/151 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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