DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment puc and SSH1

DIOPT Version :9

Sequence 1:NP_524273.1 Gene:puc / 40958 FlyBaseID:FBgn0243512 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_011536799.1 Gene:SSH1 / 54434 HGNCID:30579 Length:1060 Species:Homo sapiens


Alignment Length:683 Identity:134/683 - (19%)
Similarity:205/683 - (30%) Gaps:264/683 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ATSTARNNNSHNG-----------RC-----ECDGDGDSVSHIQSEMKMRIKREAPCLLLFMPIQ 69
            |...||.:|...|           .|     .|..:.:::..::|     .:.::|.|.:..|.:
Human   199 ACEVARRHNYFPGGVALIWATYYESCISSEQSCINEWNAMQDLES-----TRPDSPALFVDKPTE 258

  Fly    70 NTNNNNRIGANQKDYPNKRSRENLACDEVTSTTSSSTAMNGGGRTPALTRSCSSPAVYDI----- 129
            .......|.|..:.....:..||:...|:.:.....  ||           |:...:.:.     
Human   259 GERTERLIKAKLRSIMMSQDLENVTSKEIRNELEKQ--MN-----------CNLKELKEFIDNEM 310

  Fly   130 -----ETHPASPVFPHLLLG---NGRDADDPSSVGANCVLNVTCQSPNESHLQGL-KYMQIPASD 185
                 :....|.:|.||.||   |..:.::....|.:.:||||.:..|  ...|| .|..|...|
Human   311 LLILGQMDKPSLIFDHLYLGSEWNASNLEELQGSGVDYILNVTREIDN--FFPGLFAYHNIRVYD 373

  Fly   186 TPHQNIKQYFQEAYDFIEDARKTGSRVLLHCHAGISRSATIAIAYVMRYKSLSLLEAYKLVKVAR 250
            ....::..::.|||.||..|::..|:.|:||..|:||||:..|||.|:.....|.:||..||..|
Human   374 EETTDLLAHWNEAYHFINKAKRNHSKCLVHCKMGVSRSASTVIAYAMKEFGWPLEKAYNYVKQKR 438

  Fly   251 PIISPNLNFMGQLLELEQNLRKS--------------------------GVLAPATPH------- 282
            .|..||..||.||.|.|..|..|                          |...|.||.       
Human   439 SITRPNAGFMRQLSEYEGILDASKQRHNKLWRQQTDSSLQQPVDDPAGPGDFLPETPDGTPESQL 503

  Fly   283 --------------------------LNSPSNPSSSSVGLS------------------------ 297
                                      |.||.:.:.|.|.|.                        
Human   504 PFLDDAAQPGLGPPLPCCFRRLSDPLLPSPEDETGSLVHLEDPEREALLEEAAPPAEVHRPARQP 568

  Fly   298 TQSSQLVE--------------------QPEEEEKREQRERGK---------------------- 320
            .|.|.|.|                    |.||.|:.|....|:                      
Human   569 QQGSGLCEKDVKKKLEFGSPKGRSGSLLQVEETEREEGLGAGRWGQLPTQLDQNLLNSENLNNNS 633

  Fly   321 SKSDSEAMDEDGF---------DYDD-------VDSGSGSLAGSNCSS--------------RLT 355
            .:|....|::|..         .|..       ..||:...:...|..              .:|
Human   634 KRSCPNGMEDDAIFGILNKVKPSYKSCADCMYPTASGAPEASRERCEDPNAPAICTQPAFLPHIT 698

  Fly   356 SPPIT---------------PDDEAPSTSAAASSVSELDSPSSTSSSSGICSLLQSTSSSVSPRA 405
            |.|:.               |.:..|....|.|..::...|.:.::.....|||:  .|..:|:.
Human   699 SSPVAHLASRSRVPEKPASGPTEPPPFLPPAGSRRADTSGPGAGAALEPPASLLE--PSRETPKV 761

  Fly   406 ISKPNLLS--------PTRQLALFKRNSP---AKLRLDLESSYAPASPIPNTMPWL--------- 450
            :.|..||.        |:.::.:.:.:||   .|...||...::..|..|.|..:|         
Human   762 LPKSLLLKNSHCDKNPPSTEVVIKEESSPKKDMKPAKDLRLLFSNESEKPTTNSYLMQHQESIIQ 826

  Fly   451 ------------------SVPSTPVCEEAPDSR 465
                              |||:.|    ||.||
Human   827 LQKAGLVRKHTKELERLKSVPADP----APPSR 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pucNP_524273.1 DSPc 133..267 CDD:238073 51/137 (37%)
CDC14 <193..272 CDD:225297 35/78 (45%)
SSH1XP_011536799.1 SSH-N 41..248 CDD:212166 8/53 (15%)
DEK_C 263..314 CDD:285919 8/63 (13%)
DSPc 319..455 CDD:238073 51/137 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1716
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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