DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment puc and Dupd1

DIOPT Version :9

Sequence 1:NP_524273.1 Gene:puc / 40958 FlyBaseID:FBgn0243512 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_036014638.1 Gene:Dupd1 / 435391 MGIID:3647127 Length:226 Species:Mus musculus


Alignment Length:194 Identity:56/194 - (28%)
Similarity:92/194 - (47%) Gaps:32/194 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 SPAVYDIE----------THPASPVFPHLLLGNGRDADDP---SSVGANCVLNV------TCQSP 168
            :|..:::|          || .:.|:|.|.:|:...|.|.   ...|...|||.      ....|
Mouse    45 TPGAFELERLFWKGSPQYTH-VNEVWPRLHIGDEATALDRYGLQKAGFTHVLNAAHGRWNVDTGP 108

  Fly   169 NESHLQGLKYMQIPASDTPHQNIKQYFQEAYDFIEDA-RKTGSRVLLHCHAGISRSATIAIAYVM 232
            :......::|..:.|.|.|..::..:|..|..||:.| |...|::|:||..|.|||||:.:||:|
Mouse   109 DYYRDMAIEYHGVEADDVPTFDLSIFFYSAAAFIDSALRDDHSKILVHCAMGRSRSATLVLAYLM 173

  Fly   233 RYKSLSLLEAYKLVKVARPIISPNLNFMGQLLELEQNLRKSGVLAPATPHLNSPSNPSSSSVGL 296
            .:|:::|::|.:.|...|.:: ||..|:.||.||::.|.|.          ...:.|..|.:||
Mouse   174 IHKNMTLVDAIQQVAKNRCVL-PNRGFLKQLRELDKQLVKQ----------RRQAGPGDSDLGL 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pucNP_524273.1 DSPc 133..267 CDD:238073 45/143 (31%)
CDC14 <193..272 CDD:225297 32/79 (41%)
Dupd1XP_036014638.1 DUPD1 55..214 CDD:350423 50/170 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1716
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.