DRSC/TRiP Functional Genomics Resources

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Protein Alignment puc and lip-1

DIOPT Version :10

Sequence 1:NP_524273.1 Gene:puc / 40958 FlyBaseID:FBgn0243512 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001293707.1 Gene:lip-1 / 191704 WormBaseID:WBGene00003043 Length:381 Species:Caenorhabditis elegans


Alignment Length:383 Identity:100/383 - (26%)
Similarity:149/383 - (38%) Gaps:110/383 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TTTATSTARNNNSHNGR-------------CECDGDGDSVSH-------------IQSEM---KM 53
            ||...||::|....:..             .:|..:||||..             :|..:   .|
 Worm     2 TTHLPSTSQNGEEISAEQFNRIFHERNVIVLDCRSNGDSVKRANRFFCSLRLPALLQRRLMGGSM 66

  Fly    54 RIKR------------EAPCLLLFMP-------------IQNTNNNNR----IGANQK----DYP 85
            |:..            :.|.:|| :|             .:|..:|:.    :|...|    .:|
 Worm    67 RLSTVPDLKDLNNSPDQCPEVLL-IPGDSEQDEQLSAALARNLKSNHYRHFVLGEPVKTLLSQFP 130

  Fly    86 NKRSRENLACDEVTSTTSSSTAMNGGGRTPALTRSCSSPAVYDI---------ETHPASPVFP-- 139
            ..|.    |.||..:||....:|.|    .|..:..||..:.::         :.......||  
 Worm   131 TLRD----AADENWNTTFQMNSMPG----QASGQQASSGPLLNLNQLRLEGEDQGGKQRAEFPVK 187

  Fly   140 ---HLLLGNGRDA---DDPSSVGANCVLNVTCQSPNE-SHLQGLKYMQIPASDTPHQNIKQYFQE 197
               .|.|||...|   |.......:.|:|||...||. .....::|::|.|.|....|:.::|.|
 Worm   188 LTNFLYLGNAETAKNRDVLKKYSISHVINVTSNLPNTFEEDPNMRYLRISADDNASHNLTKFFPE 252

  Fly   198 AYDFIEDARKTGSRVLLHCHAGISRSATIAIAYVMRYKSLSLLEAYKLVKVARPIISPNLNFMGQ 262
            |..||:|||:..|..|:||.||||||.||.:||:|:.:..:|..||:.|:.....|:||.:||||
 Worm   253 AISFIDDARRNDSACLVHCLAGISRSVTICLAYLMKTEMCTLDSAYEWVQKRNASIAPNFHFMGQ 317

  Fly   263 LLELEQ----NLRKSGVLAPATPHLNSPS---------------NPSSSSVGLSTQSS 301
            |.:.|:    |..:.|....:.|  .|||               .|..:|...|.|||
 Worm   318 LTDYEKMLGLNSNRVGTYPSSAP--RSPSCAIEAAAVSQVGGLLTPPPTSCSASPQSS 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pucNP_524273.1 PTP_DSP_cys 135..281 CDD:475123 57/158 (36%)
lip-1NP_001293707.1 DSP_MKP_classII 185..321 CDD:350414 53/135 (39%)

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