DRSC/TRiP Functional Genomics Resources

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Protein Alignment puc and vhp-1

DIOPT Version :9

Sequence 1:NP_524273.1 Gene:puc / 40958 FlyBaseID:FBgn0243512 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001343753.1 Gene:vhp-1 / 173904 WormBaseID:WBGene00006923 Length:661 Species:Caenorhabditis elegans


Alignment Length:443 Identity:124/443 - (27%)
Similarity:184/443 - (41%) Gaps:106/443 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 QKDYPNKRSRENLACDEVTSTTS----------------SSTAMNGG----------------GR 113
            ::|.|....|...:|:...||..                |...:.||                |.
 Worm    96 EEDKPRGNKRRIASCNAPESTAKIMRVLRERLEDTDKFRSVMVLEGGFKQFAQQYPQLCESSEGM 160

  Fly   114 TPALTRSCSSPAVYDIETHPASPVFPHLLLGNGRDADDPSSVGA---NCVLNVTCQSPNESHLQG 175
            | .|.:|.|.|.:........:.:.|::.||:..|:.|.:.:.|   :.|:|::...|....::.
 Worm   161 T-RLPQSLSQPCLSQPTGDGITLITPNIYLGSQIDSLDETMLDALDISVVINLSMTCPKSVCIKE 224

  Fly   176 LK-YMQIPASDTPHQNIKQYFQEAYDFIEDARKTGSRVLLHCHAGISRSATIAIAYVMRYKSLSL 239
            .| :|:||.:|:..:.:..||..||:|:|..|:.|.:.|:||.||||||.|:||:|:|||..:..
 Worm   225 DKNFMRIPVNDSYQEKLSPYFPMAYEFLEKCRRAGKKCLIHCLAGISRSPTLAISYIMRYMKMGS 289

  Fly   240 LEAYKLVKVARPIISPNLNFMGQLLELEQNLRKSGVL---APATPH----------LNSPSNPSS 291
            .:||:.||..||.||||.||||||||.|..|.|..||   ..:.||          |..|..|.|
 Worm   290 DDAYRYVKERRPSISPNFNFMGQLLEYENVLIKDHVLDYNQASRPHRHMDYYGPSDLCPPKVPKS 354

  Fly   292 SSVGL----STQSSQLVEQPEEEEKREQRERGKSKSDSEAMDEDGFDYDDVDSGSGSLAGSNCSS 352
            :|...    ||........|...|       |.:.|:.|.              |.|.|.|  ||
 Worm   355 ASSNCVFPGSTHDESSPSSPSVSE-------GSAASEPET--------------SSSAASS--SS 396

  Fly   353 RLTSPPITPDDEAPSTSAAASSVSELDSPSSTSSSSGICSLLQSTSSSVSPRAISKPN------- 410
            ..::||..|            |.||..:.|.|.:.:|..::.........|:|:..|:       
 Worm   397 TASAPPSMP------------STSEQGTSSGTVNVNGKRNMTMDLGLPHRPKALGLPSRIGTSVA 449

  Fly   411 -LLSPTRQLALFKRNSPAKLRLDLESSYAPASPIPN-TMPWLSVPSTPVCEEA 461
             |.||:.:|:....|.|        .:.||::||.| |.|..:.|..||...:
 Worm   450 ELPSPSTELSRLSFNGP--------EAIAPSTPILNFTNPCFNSPIIPVASSS 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pucNP_524273.1 DSPc 133..267 CDD:238073 56/137 (41%)
CDC14 <193..272 CDD:225297 44/78 (56%)
vhp-1NP_001343753.1 DSP_MapKP 12..154 CDD:238723 9/57 (16%)
DSPc 179..317 CDD:238073 56/137 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 130 1.000 Inparanoid score I3216
Isobase 1 0.950 - 0 Normalized mean entropy S3731
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2281
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.950

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