DRSC/TRiP Functional Genomics Resources

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Protein Alignment puc and ssh1a

DIOPT Version :9

Sequence 1:NP_524273.1 Gene:puc / 40958 FlyBaseID:FBgn0243512 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_009299660.1 Gene:ssh1a / 101885659 ZFINID:ZDB-GENE-040724-201 Length:1030 Species:Danio rerio


Alignment Length:470 Identity:99/470 - (21%)
Similarity:153/470 - (32%) Gaps:170/470 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 ASPVFPHLLLG---NGRDADDPSSVGANCVLNVTCQSPNESHLQG-LKYMQIPASDTPHQNIKQY 194
            |:.:|.||.||   |..:.::....|...:||||.:..|  ...| ..|..:...|....::..:
Zfish   318 ATLIFDHLYLGSEWNASNLEELQESGVGHILNVTREIDN--FFPGTFCYHNVRVYDDEATDLLAH 380

  Fly   195 FQEAYDFIEDARKTGSRVLLHCHAGISRSATIAIAYVMRYKSLSLLEAYKLVKVARPIISPNLNF 259
            :.:.|:||..|:|..|:.|:||..|:||||:..|||.|:....:|.:||..||..|.|..||.:|
Zfish   381 WNDTYNFIVKAKKNHSKCLVHCKMGVSRSASTVIAYAMKEYGWTLEKAYNFVKQKRSITRPNASF 445

  Fly   260 MGQLLELE--------------------------------------------------------- 267
            |.||.|.|                                                         
Zfish   446 MRQLAEYEGILDASKQRHNRLWRPDSDCDHPECQQAAGPCYLNAETGDHITPDSTTPRVTVCCEP 510

  Fly   268 ----------------QN-------LRKSGVLA-PATP--------------------------- 281
                            ||       |..|.:.: |:||                           
Zfish   511 TAHSSPISLDLDPGHPQNYHYYFRRLSDSALESEPSTPVQAQPLVDVDRVYIEVADVEQDALLED 575

  Fly   282 -----HLNSPSNPSSSSVGLSTQS---------------SQLVEQPEEEEKREQRE--------- 317
                 |...|.:.|...:|..|.|               |.:.|:.|||.::||.|         
Zfish   576 ETFEAHEGPPVSHSGEGIGAQTCSRGPEPLEELRLRLEFSTVEEEDEEEAQKEQAEMEALTEEAK 640

  Fly   318 RGKSKSDSEAMDEDGFDYDDVDSGSGSLAGSNCSSR-------LTSPPITPDDEAPSTSAAASSV 375
            |...|...|.::|.|.|...|:    .|...|.::.       ||.........||.:|.|:..:
Zfish   641 RVDGKDSEELLNEKGIDLTSVN----HLCNENNNNNHLKMQQILTESAQVKTRLAPGSSLASKPI 701

  Fly   376 SELDSPSSTSSSSGICSLLQSTSSSVSPRAISKPNLLSPTR-------------QLALFKRNSPA 427
               .|..|.::..|:..|..:::..:|.:.:|..||....:             .::|...:.|.
Zfish   702 ---QSALSEANRRGLAPLPLNSAPCISIQMLSCANLSMTAKCGRTVSDPCLDANAMSLGNNDMPE 763

  Fly   428 KLRLDLESSYAPASP 442
            ...||.|:......|
Zfish   764 SKSLDQETETQTTLP 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pucNP_524273.1 DSPc 133..267 CDD:238073 48/136 (35%)
CDC14 <193..272 CDD:225297 36/158 (23%)
ssh1aXP_009299660.1 SSH-N 3..246 CDD:212166
DEK_C 264..312 CDD:285919
DSPc 317..453 CDD:238073 48/136 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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