DRSC/TRiP Functional Genomics Resources

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Protein Alignment puc and epm2a

DIOPT Version :9

Sequence 1:NP_524273.1 Gene:puc / 40958 FlyBaseID:FBgn0243512 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_005170620.1 Gene:epm2a / 100535304 ZFINID:ZDB-GENE-100922-143 Length:322 Species:Danio rerio


Alignment Length:203 Identity:44/203 - (21%)
Similarity:64/203 - (31%) Gaps:76/203 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 GRTPALTRSCSSPAVYD-------IETHPA-------------------------------SPVF 138
            |..|...|.|    |||       |..||.                               |.|.
Zfish    84 GSGPHHNRCC----VYDDRNMVDGIHCHPIGHWIQETGHTDEMKHTTNFYFSIAGQQAMHFSQVL 144

  Fly   139 PHLLLGN-GRDADD-----PSSVGANCVLNVTCQSP--NESH--------------------LQG 175
            |.:.||: .|..:.     ...:|...|:|...:..  |.||                    ..|
Zfish   145 PRVWLGSCPRRVEHVTLKLKQELGVTAVMNFQTEWDVINNSHGCRRDLSQPMTPETMMHLYRDSG 209

  Fly   176 LKYMQIPASDTPHQNIKQYFQEAYDFIEDARKTGSRVLLHCHAGISRSATIAIAYVMRYKSLSLL 240
            |.|:.:|..|...:...|...:|...:....:.|..|.:||:||:.|| |.|:..::.|     :
Zfish   210 LSYIWMPTQDMSTEGRIQMLPQAVFLLFGLLENGHSVYVHCNAGVGRS-TAAVCGLLMY-----V 268

  Fly   241 EAYKLVKV 248
            ..:||.||
Zfish   269 FGWKLRKV 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pucNP_524273.1 DSPc 133..267 CDD:238073 35/175 (20%)
CDC14 <193..272 CDD:225297 17/56 (30%)
epm2aXP_005170620.1 CBM20_laforin 3..112 CDD:99881 10/31 (32%)
PTPc 141..288 CDD:304379 34/142 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1716
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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