DRSC/TRiP Functional Genomics Resources

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Protein Alignment puc and ssh1

DIOPT Version :10

Sequence 1:NP_524273.1 Gene:puc / 40958 FlyBaseID:FBgn0243512 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_002932127.2 Gene:ssh1 / 100495893 XenbaseID:XB-GENE-6041963 Length:975 Species:Xenopus tropicalis


Alignment Length:339 Identity:75/339 - (22%)
Similarity:116/339 - (34%) Gaps:91/339 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 KRNGTVD----WRVGELE-WESWMRVLDHANFQTGHVYRQPQLRPKSAMSTSMVNNNDVAVPPTT 397
            ||.|.:.    || ||:: :.:.:.:|...|.|.......|   |.:..|..||.    |||.::
 Frog   783 KRQGKLSEYLKWR-GEVKHFCNLLCILVFCNQQQSTTEPTP---PNTTASVPMVQ----AVPASS 839

  Fly   398 SAYGQIDET----NLESVSAHRLALLRKEQERVRWMNSPNAYQKVEFLEYGADNPKKITKWVHDV 458
            .:.|..|.|    |:.|:::...|     |...   ||.|..|       || .|....|.:.|.
 Frog   840 GSMGGKDSTPVIANVVSLASAPAA-----QPTA---NSTNVLQ-------GA-VPTVTAKIIGDA 888

  Fly   459 NVPSASGTPVKISSVHQFSPASSNPKEFKEKQKAIKENNRLGTLSAGPQSQILDSVTYEDIALLI 523
               |.....:|:       |.|..|:..|.|....|...:....|..|.:|..:..|..|     
 Frog   889 ---STQTDALKL-------PPSLPPRLLKNKALLCKPITQTKATSCKPHTQHKECQTEGD----- 938

  Fly   524 KPDNDGTVGQSSTADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADI--------- 579
                    ||..     ||:......:......|   :|.| |||.|.:|.....:         
 Frog   939 --------GQPQ-----ILVLPVPVPVFVPVPMH---LYTQ-YAPVPLTVPLPVPVPMLIPTTLD 986

  Fly   580 --KKYVDMVKAKNSQSAPVSARSGYSQYDEVEADTVSLMQGVREHKLSQAALSASDDGLNAGISP 642
              .|.:|.:: ...:..|         .|..|||.:.:.:.:.|.:..:..||..|.|     |.
 Frog   987 NADKIIDAIE-DLKEKVP---------SDPFEADILQMAEMIAEDEEKEKTLSHGDQG-----ST 1036

  Fly   643 NNVRTSEESVNTSY 656
            .:.....|:|:|.:
 Frog  1037 YSGDLESEAVSTPH 1050

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pucNP_524273.1 PTP_DSP_cys 135..281 CDD:475123
ssh1XP_002932127.2 SSH-N 3..235 CDD:212166
DEK_C 249..301 CDD:462592
DSP_slingshot_1 304..447 CDD:350418
Blue background indicates that the domain is not in the aligned region.

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