DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment puc and styxl2

DIOPT Version :9

Sequence 1:NP_524273.1 Gene:puc / 40958 FlyBaseID:FBgn0243512 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_031752309.1 Gene:styxl2 / 100135355 XenbaseID:XB-GENE-997293 Length:1117 Species:Xenopus tropicalis


Alignment Length:435 Identity:86/435 - (19%)
Similarity:148/435 - (34%) Gaps:144/435 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 SSPAVYDIE-----------THPASPVFPHLLLGNGRDADDP---SSVGANCVLN-----VTCQS 167
            ::|.|.|::           .:....|:|::.:.....|.:.   ..:|...:||     .....
 Frog   111 NTPCVLDLQRELIKDRLESPLNSVDEVWPNVFIAEKSVAVNKGRLKRMGITHILNAGHNTTVFTG 175

  Fly   168 PNESHLQGLKYMQIPASDTPHQNIKQYFQEAYDFIEDARKT-GSRVLLHCHAGISRSATIAIAYV 231
            |:......::||.:...|.|..:|.::.:...:|:::|..| ..:||::...||||||.:..||:
 Frog   176 PDFYSGMNIQYMGVEVDDFPDSDISKFLRPGAEFLDEALLTYRGKVLVNSEMGISRSAVLVAAYL 240

  Fly   232 MRYKSLSLLEAYKLVKVARPIISPNLNFMGQLLELEQNLRKS----------------------- 273
            |.:..:::.||...::..|.|. ||..|:.||.||.:.|.:.                       
 Frog   241 MIFHHMTIQEALMTMRKKRAIY-PNDGFIMQLRELNEKLLEEREYSDQDDDANSQGSVIEAKASS 304

  Fly   274 --------GVLAPATPHLNSPSNPSSSSVGLSTQSSQ-----------LVEQPEEEEKREQ--RE 317
                    |.:..|..|..:.....::||..|..|..           |:::.|||...|:  |:
 Frog   305 IRVEEEDVGSIMGAKVHSITVEEEDTTSVMGSVMSMMGKASVVSKQPTLIDEDEEERIYEEWRRK 369

  Fly   318 RGKSKSDSEAMDE----------DGFDY---------------------DDVDSGSGSLAGSNCS 351
            :|....|.....|          |..||                     ||.|.||..:.|    
 Frog   370 QGLPPKDIPKKPENPDLKPPEEGDCGDYVKQMIHEWQNQNEKYQSLKLDDDDDDGSSLMGG---- 430

  Fly   352 SRLTSPPITPDDEAPSTSAAASSVS--ELDSPSSTSSSSGICSLLQSTSSSVS------------ 402
                        .|||..:..|||:  ::.:......:|||....:..|.|||            
 Frog   431 ------------YAPSEFSDVSSVTSQQIQALKRQLEASGINRTSRGRSDSVSTDSTWDMWNERL 483

  Fly   403 ------------------PRAISKPNLLSPTRQLALFKRNSPAKL 429
                              .|.:.:.::.|.|..|..|.:.:..||
 Frog   484 QEIEKEAKAMADKGTKQKQREVDEESVFSDTSSLFNFCKKNKDKL 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pucNP_524273.1 DSPc 133..267 CDD:238073 36/142 (25%)
CDC14 <193..272 CDD:225297 26/79 (33%)
styxl2XP_031752309.1 DSP_iDUSP27 124..282 CDD:350424 38/158 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.