DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment puc and dusp16

DIOPT Version :9

Sequence 1:NP_524273.1 Gene:puc / 40958 FlyBaseID:FBgn0243512 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001090711.1 Gene:dusp16 / 100036691 XenbaseID:XB-GENE-1009863 Length:647 Species:Xenopus tropicalis


Alignment Length:378 Identity:107/378 - (28%)
Similarity:166/378 - (43%) Gaps:65/378 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 ALTRSCSSPAVYDIETHPASPVFPHLLLGNGRDADDPSSVGAN---CVLNV--TCQSP---NESH 172
            ::..:|.|.....:.:...:.:.|||.||..||..:...:..|   .|||.  ||..|   ::||
 Frog   143 SMVPTCISQPCLPVSSVGPTRILPHLYLGCQRDVLNKELMQQNEIGYVLNASNTCPKPDFISDSH 207

  Fly   173 LQGLKYMQIPASDTPHQNIKQYFQEAYDFIEDARKTGSRVLLHCHAGISRSATIAIAYVMRYKSL 237
                 :::||.:|:..:.|..:..::.||||.|:.:..|||:||.|||||||||||||:|:...:
 Frog   208 -----FLRIPVNDSFCEKILPWLDKSVDFIEKAKASNDRVLVHCLAGISRSATIAIAYIMKRMDM 267

  Fly   238 SLLEAYKLVKVARPIISPNLNFMGQLLELEQNLR-KSGVLAPATP---HLNSPSNPSSSSVGLST 298
            ||.|||:.||..||.||||.||:||||:.|:.:: ::|..||...   .|:..:|..:.|.....
 Frog   268 SLDEAYRFVKEKRPTISPNFNFLGQLLDFEKKIKAQTGQAAPPCKLKLQLDLSTNEQAGSTDTHQ 332

  Fly   299 QSSQLVEQPEEEEKREQRER-----------------GKSKSDSE------------AMDEDGFD 334
            ..|.|..:|...|:|.|..|                 |...|.:|            ::|.....
 Frog   333 PPSPLPPRPTSAEQRPQPSRVQPPPPIEEAPLLQGLNGLHVSPAEKLGDSNKIKRSFSLDIKSLP 397

  Fly   335 YDDVDSGSGSLAGSNCSSRLTSPPIT-----------PDDEAPSTSAAASSVSE-----LDSPSS 383
            :..:.|.:...|||..::....||.|           |.:|....:...|...|     ||.|..
 Frog   398 FCGITSTACLSAGSEDNTEFYKPPATLEGGGKMCQFSPVEEVSEQTPEPSPDKEEAAGVLDKPVG 462

  Fly   384 TSSSSGICSLLQSTSSSVSPRAISKPNLLSPTRQLALFKRNSPAKLRLDLESS 436
            |..:.   :.|:....:.....:|:.:|.:|..:....:.|..|.....|.||
 Frog   463 TRPTE---ATLRQPHHAGRASVLSQRSLAAPLFRSGSMEDNRKANFLFGLSSS 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pucNP_524273.1 DSPc 133..267 CDD:238073 63/141 (45%)
CDC14 <193..272 CDD:225297 44/79 (56%)
dusp16NP_001090711.1 DSP_MapKP 10..138 CDD:238723
DSP_DUSP16 159..303 CDD:350494 64/148 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1576308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.