DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7900 and HER2

DIOPT Version :9

Sequence 1:NP_001097707.1 Gene:CG7900 / 40957 FlyBaseID:FBgn0037548 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_014021.1 Gene:HER2 / 855338 SGDID:S000004907 Length:464 Species:Saccharomyces cerevisiae


Alignment Length:457 Identity:107/457 - (23%)
Similarity:181/457 - (39%) Gaps:107/457 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 LLGLPVTIKESCALEGMTFAVGSLSRKNIKAEADGEAVKRLKLAGAIPLLVSATPEYCFSIETDT 185
            |.|...:||::...:.......|...:|.|:..|...||.||.||...|..:...|:........
Yeast    44 LTGCVASIKDNIVTKDFPTTCASHILENFKSPFDATVVKLLKQAGVHILGKTNLDEFGMGSGGVH 108

  Fly   186 LLNGRCLN---PYDSERTSGGSSGGEGSLNGAGASL------FGIGSDIGGSIRIPSLYCGIFGH 241
            .:.|..:|   |::.::..||||      :||.||:      |.:|:|.|||:|:|:.|..:.|.
Yeast   109 SIRGPVINPLYPHEDKKIMGGSS------SGAAASVACDLVDFALGTDTGGSVRLPACYGSVLGF 167

  Fly   242 KPSGGVVSVKG--HFPNSLDP----------------NIGHYLVEGPITRFAEDLSELLQVMAGK 288
            |||.|.:|..|  .:..|||.                .:..|.::.| |..:.:|.||:      
Yeast   168 KPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTLDKYDMKDP-TSLSVELRELI------ 225

  Fly   289 ENSSKLRLNEPVQLNQIKVQYALAFEGINGWMHMAVDKDITGAICKATTHLKTLGLNVKKVKLPN 353
            |.:.|:|  .|:::..:|           .:.|.::..............|..|||.:..|.:|:
Yeast   226 EGNKKVR--RPLKVGIVK-----------EFSHESMPIGFHRLYLSLLEKLINLGLEIYPVSIPS 277

  Fly   354 LENSVEM--------ALSGIAGQDLMDYLLTDENPEGSGKVRETVWEIVKSVRGHSKYTT---NA 407
            ::|.:.:        |.|.::..|.:.|...|...:        :.:.:......||:.|   |.
Yeast   278 VKNCLPIYYTLSPAEAASNLSRYDGIRYGYRDSELD--------IKDGILFAPTRSKFGTEVKNR 334

  Fly   408 LIFELMRRTGAF--MSQSKINQYMKETR---ELIGEFE------NLLGDN-------GVLLFPTL 454
            :|.      |.:  .|.:..|.::|..:   .||.||:      |:|.::       .:|:.||.
Yeast   335 IIL------GNYNLCSDAFKNNFIKAEKLRVNLIDEFDGIFRFPNVLTNSKGNPDGLDLLIVPTS 393

  Fly   455 N-LPA-------PRHKWSILSLWGVDYTLMFNVLGLPVTHVPMGLNERGLPIGLSVIGAPNQDRL 511
            : ||.       ...|....|.....:|:..::.|||...:|  |.|: .||||.|:|....|..
Yeast   394 SKLPGSIRDFEEEEAKSPANSYINDVFTVPMSLAGLPSLSMP--LKEK-TPIGLQVVGQYGDDST 455

  Fly   512 CL 513
            .|
Yeast   456 VL 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7900NP_001097707.1 PRK07488 44..530 CDD:236030 107/457 (23%)
GatA 47..531 CDD:223232 107/457 (23%)
HER2NP_014021.1 gatA 1..464 CDD:272925 107/457 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0154
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.729574 Normalized mean entropy S1380
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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