DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7900 and qrsl1

DIOPT Version :9

Sequence 1:NP_001097707.1 Gene:CG7900 / 40957 FlyBaseID:FBgn0037548 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001072779.1 Gene:qrsl1 / 780239 XenbaseID:XB-GENE-5787967 Length:524 Species:Xenopus tropicalis


Alignment Length:544 Identity:144/544 - (26%)
Similarity:223/544 - (40%) Gaps:115/544 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LLTLSVQELRRRLQSRQLTSVELVRTYIERIEAVNKHLNALIESRFTAALEEATETDDLIASCQT 108
            :|.:|::|....|:..|:...||.:..:..|:..: .|||.|......||::|.|.|        
 Frog     1 MLGMSLREAAAALRLGQIKPTELCQKCLSFIKETS-FLNAYITVTEDFALKQAAEAD-------- 56

  Fly   109 AAEVEKLFEERP---LLGLPVTIKESCALEGMTFAVGSLSRKNIKAEADGEAVKRLKLAGAIPLL 170
                |:..:.:|   |.|:|:.||::.:..|:.....|...|...|..:...|::|...||:.:.
 Frog    57 ----ERFIQGKPLGDLDGIPIAIKDNFSTAGIETTCASRMLKGYIAPYNATVVQKLFDQGAVFMG 117

  Fly   171 VSATPEYCF-SIETDTLLNGRCLNPYDSERT--------------------SGGSSGGEGSLNGA 214
            .:...|:.. |..||::. |...||:...|:                    :||||||......|
 Frog   118 KTNLDEFAMGSGSTDSIF-GPVKNPWSYSRSYIDKTSLSHHAAKDDSDWVITGGSSGGSACAVSA 181

  Fly   215 GASLFGIGSDIGGSIRIPSLYCGIFGHKPSGGVVSVKGHFP--NSLDPNIGHYLVEGPITRFAED 277
            |.....||||.|||.|.|:.:||:.|.||:.|:||..|..|  ||:|       |.|.:||..:|
 Frog   182 GTCYLAIGSDTGGSTRNPASHCGVVGLKPTYGLVSRHGLIPLVNSMD-------VPGIVTRCVDD 239

  Fly   278 LSELLQVMAGKENSSKLRLNEPVQLNQI--KVQYALAFEGINGWMHM-AVDKDITGAICKATTHL 339
            .:.:|.|:||.:......:.:|.|...:  ||.......||....|. .:..:|.....:....|
 Frog   240 AATVLGVLAGHDPYDSTTIQDPFQPFSLPEKVDVRNVCIGIPKEYHAPGLSAEILSLWSETADLL 304

  Fly   340 KTLGLNVKKVKLPNLENSV---------EMALSGIAGQDLMDY---LLTDENPEG--SGKVRETV 390
            :..|..|.:|.||:...|:         |:| |.:|..|.::|   ...|::.|.  :...||..
 Frog   305 ENAGAKVVEVSLPHTPYSIVCYHVLCTAEVA-SNMARFDGLEYGHRSDIDDSTEALYAATRREGF 368

  Fly   391 WEIVKS----------VRGHSKYTTNALIFELMRRTGAFMSQSKINQYMKETRELIGEFENLLGD 445
            .|:|:.          .|.:.||               |:...|:       |.||.:....:.:
 Frog   369 NEVVRGRILSGNYFLLKRNYEKY---------------FVKAQKV-------RRLIADDFVKVFN 411

  Fly   446 NG--VLLFP-TLNLPAPRHKWSILSLWGVD----------YTLMFNVLGLPVTHVPMGLNERGLP 497
            :|  |||.| ||...||     .|.....|          :|...|:.|||...||..|:.||||
 Frog   412 SGVHVLLTPTTLGDAAP-----YLEFIQEDNRTRSAQEDVFTQCANMAGLPAVTVPAALSSRGLP 471

  Fly   498 IGLSVIGAPNQDRLCLRVAVELER 521
            :||..||....::..|.:|...|:
 Frog   472 LGLQFIGRAFCEQQLLTIAKWFEK 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7900NP_001097707.1 PRK07488 44..530 CDD:236030 144/544 (26%)
GatA 47..531 CDD:223232 143/541 (26%)
qrsl1NP_001072779.1 gatA 13..494 CDD:234572 140/529 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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