DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7900 and Qrsl1

DIOPT Version :9

Sequence 1:NP_001097707.1 Gene:CG7900 / 40957 FlyBaseID:FBgn0037548 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001014056.1 Gene:Qrsl1 / 309911 RGDID:1359490 Length:525 Species:Rattus norvegicus


Alignment Length:548 Identity:138/548 - (25%)
Similarity:221/548 - (40%) Gaps:125/548 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LLTLSVQELRRRLQSRQLTSVELVRTYIERIEAVNKHLNALIESRFTAALEEATETDDLIASCQT 108
            :|..:::|:...|:...:|..||.:..:..|:. .|:|||.|......||::|.|::......|:
  Rat     1 MLGRTLREVSSALKQGHITPTELCKKCLSLIKK-TKYLNAYITVSEEVALKQAEESEKRYKQGQS 64

  Fly   109 AAEVEKLFEERPLLGLPVTIKESCALEGMTFAVGSLSRKNIKAEADGEAVKRLKLAGAIPLLVSA 173
            ..:::         |:||.:|::.:..|:.....|...|......:...|:||...||:.:..:.
  Rat    65 LGDLD---------GIPVAVKDNFSTSGIETTCASNMLKGYLPPYNATVVQRLLDQGALLMGKTN 120

  Fly   174 TPEYCF-SIETDTLLNGRCLNPY------------DSERTS-----GGSSGGEGSLNGAGASLFG 220
            ..|:.. |..||.:. |...||:            |::..|     ||||||..:...|......
  Rat   121 LDEFAMGSGSTDGVF-GPVKNPWTYSKQYRERSRQDAQEDSHWLITGGSSGGSAAAVAAFTCFAA 184

  Fly   221 IGSDIGGSIRIPSLYCGIFGHKPSGGVVSVKGHFP--NSLDPNIGHYLVEGPITRFAEDLSELLQ 283
            :|||.|||.|.|:.:||..|.|||.|:||..|..|  ||:|       |.|..||..:|.:.:|.
  Rat   185 LGSDTGGSTRNPAAHCGTVGFKPSYGLVSRHGLIPLVNSMD-------VPGIFTRCVDDTAIVLG 242

  Fly   284 VMAGKENSSKLRLNEPVQLNQIKVQYALAFEGING--------WMHMAVDKDITGAICKATTHLK 340
            |:||.:......:|:||:...:.     :...::|        ::...:..:|.....:|....:
  Rat   243 VLAGHDPKDSTTVNDPVKPTTLP-----SVPDVSGLCIGIPKEYLVPELSSEIRSLWSQAADLFE 302

  Fly   341 TLGLNVKKVKLPNLENSV---------EMALSGIAGQDLMDYLLTDENPEGSGKVRETVWEIVKS 396
            ..|..|.:|.||:...|:         |:| |.:|..|.:.|                       
  Rat   303 AEGARVIEVCLPHTCYSIVCYHVLCTSEVA-SNMARFDGLQY----------------------- 343

  Fly   397 VRGH----SKYTTNALIFELMRRTG-------------AFMSQSKINQY----MKETRELIGEFE 440
              ||    ...:|.|| :...|:.|             .|:.:.....|    .|..|.::.:|.
  Rat   344 --GHRSAVDMSSTEAL-YAATRQEGFNDVVKGRILSGNFFLLKENYENYFVKAQKVRRLIVNDFV 405

  Fly   441 NLLGDN-GVLLFP-TLNLPAPRHKWSILSLWGVD----------YTLMFNVLGLPVTHVPMGLNE 493
            |:.|.. .|||.| ||....|     .|.....|          :|...|:.|||..:||:.|:.
  Rat   406 NVFGSGVDVLLTPTTLTQAVP-----YLEFIKEDNRTRSAQDDIFTQAVNMAGLPAVNVPVALSS 465

  Fly   494 RGLPIGLSVIGAPNQDRLCLRVAVELER 521
            :||||||.:||....|:..|.||...|:
  Rat   466 QGLPIGLQLIGRAFCDQQLLTVAKWFEK 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7900NP_001097707.1 PRK07488 44..530 CDD:236030 138/548 (25%)
GatA 47..531 CDD:223232 137/545 (25%)
Qrsl1NP_001014056.1 PRK07488 5..493 CDD:236030 136/542 (25%)
gatA 13..492 CDD:234572 135/533 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0154
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.