DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7900 and Y53F4B.18

DIOPT Version :9

Sequence 1:NP_001097707.1 Gene:CG7900 / 40957 FlyBaseID:FBgn0037548 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_497103.1 Gene:Y53F4B.18 / 190217 WormBaseID:WBGene00013164 Length:535 Species:Caenorhabditis elegans


Alignment Length:543 Identity:186/543 - (34%)
Similarity:298/543 - (54%) Gaps:34/543 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FLRLIVIL-------VKVIALIVSPLLEAFVYRPKSKRTLIPPIRSRLLTLSVQELRRRLQSRQL 61
            ||.|::.:       ::.:..:|:......||        :.|...|||.:|..:..:.:..:::
 Worm    11 FLNLLLTISAAYFYTIRFVFWLVNTFFRERVY--------VTPPTDRLLLISATQAVQMISQKEI 67

  Fly    62 TSVELVRTYIERIEAVNKHLNALIESRFTAALEEATETDDLIASCQTAAEVEKLFEERPLLGLPV 126
            :|..||.:||.|||.||..:||::...|.:|.|:|.|.|..||... ..:::|..||:||.|:|.
 Worm    68 SSTALVESYIHRIEQVNNTINAVVVKLFESAREQANEVDSFIALAD-EDDIKKKLEEKPLYGVPF 131

  Fly   127 TIKESCALEGMTFAVGSLSRKNIKAEADGEAVKRLKLAGAIPLLVSATPEYCFSIETDTLLNGRC 191
            |:|::..:|......|..:||:.|.:...||:|||:.||.|.|.::..||.|..:|:...:.||.
 Worm   132 TMKDALEVENEIITCGVFNRKSTKCDRTAEAIKRLQAAGGILLAITNVPEVCMWVESVNTIYGRS 196

  Fly   192 LNPYDSERTSGGSSGGEGSLNGAGASLFGIGSDIGGSIRIPSLYCGIFGHKPSGGVVSVKGHFPN 256
            .||||:.|.:||||||||:|.|:|.|:.|:|||||||||:|:.:.|:||.||:.||:.:.||.|.
 Worm   197 KNPYDARRMTGGSSGGEGALLGSGGSVIGVGSDIGGSIRMPAFFNGVFGLKPTPGVIPLIGHVPE 261

  Fly   257 SLDPNIGHYLVEGPITRFAEDLSELLQVMAGKENSSKLRLNEPVQLNQIKVQYALAFEGINGW-M 320
            ...... |.|..||:.||||||..:|::||| ||:..|.|:|||...:::|.|   .|||.|. :
 Worm   262 PTGYKT-HMLRIGPMCRFAEDLPLMLRIMAG-ENAQSLNLHEPVSGKKLRVFY---MEGITGSPI 321

  Fly   321 HMAVDKDITGAICKATTHL-KTLGLNVKKVKLPNLENSVE-MALSGIAGQDLMD-----YLLTDE 378
            ...::.::..|:.||...| :...:..:.::||:.::::| ..||  ..:|..|     .:|..:
 Worm   322 IQPLEDEMRYALKKAVRFLERKYDIVAQGIELPSAKHAMEFFTLS--MHEDTTDPAFNKLMLCTK 384

  Fly   379 NPEGSGKVRETVWEIVKSVRGHSKYTTNALIFELMRRTGAFMSQSKINQYMKETRELIGEFENLL 443
            ..:|.   .....||.|.:.|:|.:|.:.::..::.......|::.....:.:...|..:.:.||
 Worm   385 GTKGE---VNCFTEIFKYMAGNSNHTLSGIVAGIIDSRDPPFSEAHTKNLLYKRDRLKRQVKELL 446

  Fly   444 GDNGVLLFPTLNLPAPRHKWSILSLWGVDYTLMFNVLGLPVTHVPMGLNERGLPIGLSVIGAPNQ 508
            |.:|:||||:....|..|...||:.:...||.::|||.:||...|:||:.||||:|:.|||....
 Worm   447 GTDGILLFPSWPCTAMYHNEPILAPFNFCYTALWNVLSVPVVQCPLGLDSRGLPLGVQVIGNQYT 511

  Fly   509 DRLCLRVAVELERAFGGWKPPVP 531
            ||..:.:|..||..|.||.|..|
 Worm   512 DRNLIAIAQVLEEGFNGWTPAGP 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7900NP_001097707.1 PRK07488 44..530 CDD:236030 177/493 (36%)
GatA 47..531 CDD:223232 175/491 (36%)
Y53F4B.18NP_497103.1 GatA 47..532 CDD:223232 177/495 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0154
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.729574 Normalized mean entropy S1380
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D852596at2759
OrthoFinder 1 1.000 - - FOG0002245
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43372
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X256
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.870

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