DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-B and chrm1b

DIOPT Version :9

Sequence 1:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster
Sequence 2:XP_001334664.4 Gene:chrm1b / 794658 ZFINID:ZDB-GENE-070705-188 Length:487 Species:Danio rerio


Alignment Length:886 Identity:156/886 - (17%)
Similarity:259/886 - (29%) Gaps:455/886 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 WQTILIAICLAICIILTVGGNILVLLAFIVDRNIRQPSNYFIASLAATDMLIGTVSMPFYTIYVL 195
            |:.:||.:......::|:.||.||:::..|:..:|..|||::.|||..|:::|||||..||.||:
Zfish    23 WEVVLIVLVTGPLSLITILGNSLVVISIRVNSQLRTISNYYLLSLAVADLILGTVSMNLYTAYVI 87

  Fly   196 KGYWDLGPMLCDLWLSVDYTVCLVSQYTVLLITIDRYCSVKIAAKYRSWRTRTRVIYMVTITWII 260
            .|.|.|||:.|||||::||.|...|...:|:|:.|||.||.....||:.||......::.:.|:|
Zfish    88 LGRWTLGPLACDLWLTLDYVVSNASVMNLLVISFDRYFSVTRPLTYRTKRTPKTAAVLIALAWVI 152

  Fly   261 PALLFFISIFGWEHFTGKRDLLPGQ-CAVQFLKDPIFNTALIIGYYWTTLIVLFVLYAGIYKTAY 324
            ..:|:..:|..|.|..|:....... |::.|||.|.......|..::..:.::.:||..||   :
Zfish   153 SFILWGPAILFWPHVMGRPSGAEAHVCSIPFLKVPPITYGTAIAAFYLPVSIMIILYWRIY---W 214

  Fly   325 DMQKRSEAKQRKMQSMVALSAGAMSGMAGHAAGIGVIEEKILKTKVELAGDQTDLDSACTTVIKR 389
            :::.|::                  |:||.   :|.::.                          
Zfish   215 EIENRAK------------------GLAGF---VGSVKN-------------------------- 232

  Fly   390 LSGSGQANPLAVATEEVEKMTPEQRRASAAKIQEEAKKREAAVDAEKSERSSSPAFDSDEESSVN 454
                        |||.:|                                    .||        
Zfish   233 ------------ATEILE------------------------------------GFD-------- 241

  Fly   455 QAQQLITQQKLNNMRKRSSIGLVFGAQAALLATRGKGNLQKSTTNSKSIEAMHQYHHHQQHHHNQ 519
                   :|.::....:|::.:    ....::.:|:|                            
Zfish   242 -------KQSMHQTSSKSTLSI----SREGISKKGQG---------------------------- 267

  Fly   520 SPLQRAQSKEEMRSLHHHQNQQQPHHQHHQNQPNPPLDRPKRTSCST---LSQIAEHDRLVDLSA 581
                                                    |...|.|   .::.|.|        
Zfish   268 ----------------------------------------KSVGCFTWILRNKTAAH-------- 284

  Fly   582 PPTLLNTSDPLSPVDLAPIEVPSDQVHQGLVQTILPPPDAFQCPTPLSDDYSDRPFGNSSGNSEL 646
                                                            :.|.: |:.:||.|:| 
Zfish   285 ------------------------------------------------ESYKE-PYSSSSWNTE- 299

  Fly   647 ALTYDLMTNSELRYMDESSAMLASVTANSTTSPNDSVQGKPPVLPPPPPARRNPPKSNLNQSLSQ 711
                           |...::|:|.| :....||:.:                           :
Zfish   300 ---------------DVDDSVLSSST-DEEHEPNNKL---------------------------K 321

  Fly   712 TPSQNQSPSQSLSLNLNPNHNQSQSQSIEEAVAIEKRLLVSYTGIEDFAKVRRESCIEAICLLDV 776
            .||.|.|     ::.|...|.:|....                |:::                  
Zfish   322 APSSNPS-----AIKLKDLHCRSDDTK----------------GVQE------------------ 347

  Fly   777 PGKLAADCPHRRASSPMETSSKDAILYSPMPPMPLSPKVKTSTPQTGTPQSAAGVTPPVPLERIE 841
                        .:||.|..:|..         .|.||                           
Zfish   348 ------------QNSPAERLTKQC---------HLKPK--------------------------- 364

  Fly   842 ERETSDSNTNKMPSTSGTTSSTGGVGGGGEQDGVGATKKNAGDDDANREEKSLAASRNSSKRAFI 906
               .||                                                           
Zfish   365 ---KSD----------------------------------------------------------- 367

  Fly   907 HSIGKHFKSKKALPLILGVGGRQKSKSENRARKAFRTISFILGCFVACWTPYHVLALVEGFCRHP 971
            |||.:..::|..:.||:            :.:||.||:|.||..|:..||||:::.|..    ..
Zfish   368 HSIRQQLRAKHRIILII------------KEKKAARTLSAILLAFILTWTPYNIMVLAS----IS 416

  Fly   972 PCINEHLYMFSYFLCYANSPMNPFCYALANQQFKKTFTRIL 1012
            .|:.|.|:...|:|||.||.:||.||||.|:.|:.||..:|
Zfish   417 YCVPEKLWQLGYWLCYVNSTVNPMCYALCNESFRVTFKSLL 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-BNP_649764.1 7tm_1 150..>341 CDD:278431 65/191 (34%)
7tm_4 150..>336 CDD:304433 65/186 (35%)
chrm1bXP_001334664.4 7tm_4 37..>162 CDD:304433 51/124 (41%)
7tm_1 42..>224 CDD:278431 66/202 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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