DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-B and chrm5b

DIOPT Version :9

Sequence 1:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster
Sequence 2:NP_001025331.1 Gene:chrm5b / 561491 ZFINID:ZDB-GENE-041001-169 Length:457 Species:Danio rerio


Alignment Length:861 Identity:164/861 - (19%)
Similarity:245/861 - (28%) Gaps:427/861 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 LLAFIVDRNIRQPSNYFIASLAATDMLIGTVSMPFYTIYVLKGYWDLGPMLCDLWLSVDYTVCLV 219
            :|:|.|:..::..:||::.|||..|::||..||..||.|:|.|||.||...|||||::||.....
Zfish     1 MLSFKVNSQLKTVNNYYLLSLAFADLIIGVFSMNLYTCYILMGYWSLGNTACDLWLALDYVASNA 65

  Fly   220 SQYTVLLITIDRYCSVKIAAKYRSWRTRTRVIYMVTITWIIPALLFFISIFGWEHFTGKRDLLPG 284
            |...:|:|:.|||.|:.....||:.||..|...|:.:.|:|..:|:...|..|::|.|:|.:...
Zfish    66 SVMNLLVISFDRYFSITRPLTYRAKRTPKRAGIMIGMAWLISFILWAPPILCWQYFVGERKVPLD 130

  Fly   285 QCAVQFLKDPIFNTALIIGYYWTTLIVLFVLYAGIYKTAYDMQKRSEAKQRKMQSMVALSAGAMS 349
            ||.:||..:||......|..::..:.::.:||..|||..                          
Zfish   131 QCQIQFFSEPIITFGTAIAAFYVPVSIMTILYCKIYKET-------------------------- 169

  Fly   350 GMAGHAAGIGVIEEKILKTKVELAGDQTDLDSACTTVIKRLSGSGQANPLAVATEEVEKMTPEQR 414
                         ||..|...||.|                                        
Zfish   170 -------------EKRTKNLAELQG---------------------------------------- 181

  Fly   415 RASAAKIQEEAKKREAAVDAEKSERSSSPAFDSDEESSVNQAQQLITQQKLNNMRKRSSIGLVFG 479
                                       .|:.||.:...|.  :.::......|.|.        |
Zfish   182 ---------------------------YPSLDSQDGPKVR--KPILRCFSFKNKRD--------G 209

  Fly   480 AQAALLATRGKGNLQKSTTNSKSIEAMHQYHHHQQHHHNQSPLQRAQSKEEMRSLHHHQNQQQPH 544
            .||:..::                              |||.:.|                    
Zfish   210 TQASWSSS------------------------------NQSYVTR-------------------- 224

  Fly   545 HQHHQNQPNPPLDRPKRTSCSTLSQIAEHDRLVDLSAPPTLLNTSDPLSPVDLAPIEVPSDQVHQ 609
                                                                             
Zfish   225 ----------------------------------------------------------------- 224

  Fly   610 GLVQTILPPPDAFQCPTPLSDDYSDRPFGNSSGNSELALTYDLMTNSELRYMDESSAMLASVTAN 674
                            |.|..|                   ||.|.||           ...|.|
Zfish   225 ----------------TTLQSD-------------------DLWTKSE-----------QVTTLN 243

  Fly   675 STTSPNDSVQGKPPVLPPPPPARRNPPKSNLNQSLSQTPSQNQSPSQSLSLNLNPNHNQSQSQSI 739
            |.||..|.                   ..::::|..:...:||.|         |.....|    
Zfish   244 SYTSSEDD-------------------DRSVSESTPRESFKNQEP---------PVSKNGQ---- 276

  Fly   740 EEAVAIEKRLLVSYTG---IEDFAKVRRESCIEAICLLDVPGKLAADCPHRRASSPMETSSKDAI 801
                      ||.|..   :.|.||                      |        .:|::|..:
Zfish   277 ----------LVCYEDSKYLSDLAK----------------------C--------SQTNNKKCL 301

  Fly   802 LYSPMPPMPLSPKVKTSTPQTGTPQSAAGVTPPVPLERIEERETSDSNTNKMPSTSGTTSSTGGV 866
            .|.      ..|.:...|...|..:|          ||....::||..     :.|.|:|||   
Zfish   302 SYK------FKPIISDITVLQGNSES----------ERANPDQSSDQQ-----APSSTSSST--- 342

  Fly   867 GGGGEQDGVGATKKNAGDDDANREEKSLAASRNSSKRAFIHSIGKHFKSKKALPLILGVGGRQKS 931
                                 ..|:.:|.......||               :.||         
Zfish   343 ---------------------KPEDPNLKIQMTKRKR---------------MVLI--------- 362

  Fly   932 KSENRARKAFRTISFILGCFVACWTPYHVLALVEGFCRHPPCINEHLYMFSYFLCYANSPMNPFC 996
                :.:||.:|:|.||..|:..||||:::.|:..||.:  ||...|:...|:|||.||.:||.|
Zfish   363 ----KEKKAAQTLSAILLAFLLTWTPYNIMVLISTFCSN--CIPTSLWQLGYWLCYVNSTVNPMC 421

  Fly   997 YALANQQFKKTFTRIL 1012
            |||.|:.|:|||..::
Zfish   422 YALCNKTFQKTFWMLI 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-BNP_649764.1 7tm_1 150..>341 CDD:278431 62/185 (34%)
7tm_4 150..>336 CDD:304433 62/180 (34%)
chrm5bNP_001025331.1 7tm_1 1..>174 CDD:278431 64/211 (30%)
7tm_4 16..>116 CDD:304433 41/99 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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