DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-B and chrm5a

DIOPT Version :9

Sequence 1:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster
Sequence 2:NP_001018639.1 Gene:chrm5a / 553978 ZFINID:ZDB-GENE-080723-32 Length:490 Species:Danio rerio


Alignment Length:884 Identity:168/884 - (19%)
Similarity:253/884 - (28%) Gaps:441/884 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 ALWQTILIAICLAICIILTVGGNILVLLAFIVDRNIRQPSNYFIASLAATDMLIGTVSMPFYTIY 193
            :||:.|.||...||...:|:.|||||:|:|.|:..::..:||::.|||..|::||..||..||.|
Zfish    21 SLWEVIAIATVSAIVSFITIIGNILVMLSFKVNSQLKTVNNYYLLSLAFADLIIGVFSMNLYTSY 85

  Fly   194 VLKGYWDLGPMLCDLWLSVDYTVCLVSQYTVLLITIDRYCSVKIAAKYRSWRTRTRVIYMVTITW 258
            :|.|||.||.:.|||||::||.....|...:|:|:.|||.|:.....||:.||......|:.:.|
Zfish    86 ILMGYWALGSLACDLWLALDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTPKIAGIMIGLAW 150

  Fly   259 IIPALLFFISIFGWEHFTGKRDLLPGQCAVQFLKDPIFNTALIIGYYWTTLIVLFVLYAGIYKTA 323
            ::..:|:...|..|::|.|||.:...||.:||..:|:......|..::..:.|:.:||..|||..
Zfish   151 LVSFILWAPPILCWQYFVGKRTVPERQCQIQFFSEPVITFGTAIAAFYFPVSVMTILYCLIYKET 215

  Fly   324 YDMQKRSEAKQRKMQSMVALSAGAMSGMAGHAAGIGVIEEKILKTKVELAGDQTDLDSACTTVIK 388
                                                   |:..|...||.|..:..:|       
Zfish   216 ---------------------------------------ERRTKDLAELQGINSSTNS------- 234

  Fly   389 RLSGSGQANPLAVATEEVEKMTPEQRRASAAKIQEEAKKREAAVDAEKSERSSSPAFDSDEESSV 453
                ||.|.|..:.:                                        .|.....|:.
Zfish   235 ----SGDAQPQKIRS----------------------------------------CFGCKHVSNT 255

  Fly   454 NQAQQLITQQKLNNMRKRSSIGLVFGAQAALLATRGKGNLQKSTTNSKSIEAMHQYHHHQQHHHN 518
            ::.|                         ||..|.....|....||..|.               
Zfish   256 SRTQ-------------------------ALSHTNAAKTLDDQLTNFNSY--------------- 280

  Fly   519 QSPLQRAQSKEEMRSLHHHQNQQQPHHQHHQNQPNPPLDRPKRTSCSTLSQIAEHDRLVDLSAPP 583
                  |.|:||.||    .|.|:                    ||                   
Zfish   281 ------ASSEEEDRS----GNFQE--------------------SC------------------- 296

  Fly   584 TLLNTSDPLSPVDLAPIEVPSDQVHQGLVQTILPPPDAFQCPTPLSDDYSDRPFGNSSGNSELAL 648
                                                                             
Zfish   297 ----------------------------------------------------------------- 296

  Fly   649 TYDLMTNSELRYMDESSAMLASVTANSTTSPNDSVQGKPPVLPPPPPARRNPPKSNLNQSLSQTP 713
                                                                             
Zfish   297 ----------------------------------------------------------------- 296

  Fly   714 SQNQSPSQSLSLNLNPNHNQSQSQSIEEAVAIEKRLLVSYTGIEDFAKVRRESCIEAICLLDVPG 778
                            .|.:::|:|.||               |:|              ...|.
Zfish   297 ----------------RHQENKSESYEE---------------ENF--------------FPTPV 316

  Fly   779 KLAADCPHRRASSPMETSSKDAILYSPMPPMPLSPKVKTSTPQTGTPQSAAGVTPPVPLERIEER 843
            |          :||  |.:|..:.|. ..|..:||                              
Zfish   317 K----------ASP--TKTKKCVSYK-FKPKDVSP------------------------------ 338

  Fly   844 ETSDSNTNKMPSTSGTTSSTGGVGGGGEQDGVGATKKNAGDDDANREEKSLAASRNSSKRAFIHS 908
             ..::|.:..|..|..:|:                            |...|.|.:||.:....:
Zfish   339 -LKNTNGDAKPGASSFSSA----------------------------ESVNAPSSSSSSKPIDGT 374

  Fly   909 IGKHFKSKKALPLILGVGGRQKSKSENRARKAFRTISFILGCFVACWTPYHVLALVEGFCRHPPC 973
            :......:|.:.||             :.:||.:|:|.||..|:..||||:::.|:..||  ..|
Zfish   375 LKCQITKRKRMVLI-------------KEKKAAQTLSAILLAFILTWTPYNIMVLISTFC--SDC 424

  Fly   974 INEHLYMFSYFLCYANSPMNPFCYALANQQFKKTFTRIL 1012
            |...|:...|:|||.||.:||.||||.|:.|:|||..:|
Zfish   425 IPLSLWHLGYWLCYVNSTVNPMCYALCNKTFQKTFRMLL 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-BNP_649764.1 7tm_1 150..>341 CDD:278431 66/190 (35%)
7tm_4 150..>336 CDD:304433 66/185 (36%)
chrm5aNP_001018639.1 7tm_4 34..>167 CDD:304433 52/132 (39%)
7tm_1 42..448 CDD:278431 150/846 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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