DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-B and Chrm5

DIOPT Version :9

Sequence 1:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster
Sequence 2:NP_059058.1 Gene:Chrm5 / 53949 RGDID:620027 Length:531 Species:Rattus norvegicus


Alignment Length:912 Identity:189/912 - (20%)
Similarity:296/912 - (32%) Gaps:413/912 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 MSGSS-SDSEILG-PV----LPPFALWQTILIAICLAICIILTVGGNILVLLAFIVDRNIRQPSN 169
            |.|.| ::|.:.| ||    |....||:.|.||:..|:..::|:.||:||:::|.|:..::..:|
  Rat     1 MEGESYNESTVNGTPVNHQALERHGLWEVITIAVVTAVVSLMTIVGNVLVMISFKVNSQLKTVNN 65

  Fly   170 YFIASLAATDMLIGTVSMPFYTIYVLKGYWDLGPMLCDLWLSVDYTVCLVSQYTVLLITIDRYCS 234
            |::.|||..|::||..||..||.|:|.|.|.||.:.|||||::||.....|...:|:|:.|||.|
  Rat    66 YYLLSLACADLIIGIFSMNLYTTYILMGRWVLGSLACDLWLALDYVASNASVMNLLVISFDRYFS 130

  Fly   235 VKIAAKYRSWRTRTRVIYMVTITWIIPALLFFISIFGWEHFTGKRDLLPGQCAVQFLKDPIFNTA 299
            :.....||:.||..|...|:.:.|::..:|:..:|..|::..|||.:.|.:|.:|||.:|.....
  Rat   131 ITRPLTYRAKRTPKRAGIMIGLAWLVSFILWAPAILCWQYLVGKRTVPPDECQIQFLSEPTITFG 195

  Fly   300 LIIGYYWTTLIVLFVLYAGIYKTAYDMQKRSEAKQRKMQSMVALSAGAMSGMAGHAAGIGVIEEK 364
            ..|..::..:.|:.:||..||:                                           
  Rat   196 TAIAAFYIPVSVMTILYCRIYR------------------------------------------- 217

  Fly   365 ILKTKVELAGDQTDLDSACTTVIKRLSGSGQANPLAVATEEVEKMTPEQRRASAAKIQEEAKKRE 429
                                                    |.||.|.:......:....||||||
  Rat   218 ----------------------------------------ETEKRTKDLADLQGSDSVAEAKKRE 242

  Fly   430 AAVDAEKSERSSSPAFDSDEESSVNQAQQLITQQKLNNMRKRSSIGLVFGAQAALLATRGKGNLQ 494
            .|      :|:...:|.|....|:.|.::  .|...::.|:.:|             |.||    
  Rat   243 PA------QRTLLRSFFSCPRPSLAQRER--NQASWSSSRRSTS-------------TTGK---- 282

  Fly   495 KSTTNSKSIEAMHQYHHHQQHHHNQSPLQRAQSKEEMRSLHHHQNQQQPHHQHHQNQPNPPLDRP 559
              ||.:..:.|               ..::|:                                 
  Rat   283 --TTQATDLSA---------------DWEKAE--------------------------------- 297

  Fly   560 KRTSCSTLSQIAEHDRLVDLSAPPTLLNTSDPLSPVDLAPIEVPSDQVHQGLVQTILPPPDAFQC 624
            :.|:||:.....:       .|.||                   :|.|.|.:.::     :|.:.
  Rat   298 QVTTCSSYPSSED-------EAKPT-------------------TDPVFQMVYKS-----EAKES 331

  Fly   625 PTPLSDDYSDRPFGNSSGNSELALTYDLMTNSELRYMDESSAMLASVTANSTTSPNDSVQGKPPV 689
            |            |..|...|...|                      ..|:.|..:|        
  Rat   332 P------------GKESNTQETKET----------------------VVNTRTENSD-------- 354

  Fly   690 LPPPPPARRNPPKSNLNQSLSQTPSQNQSPSQSLSLNLNPNHNQSQSQSIEEAVAIEKRLLVSYT 754
                                ..||....||:.:         ::.:||   :.||.:.||:|...
  Rat   355 --------------------YDTPKYFLSPAAA---------HRLKSQ---KCVAYKFRLVVKAD 387

  Fly   755 GIED----FAKVRRESCIEAICLLDVPGKLAADCPHRRASSPMETSSKDAILYSPMPPMPLSPKV 815
            |.::    ..||:...|                      |.|:   |||                
  Rat   388 GTQETNNGCRKVKIMPC----------------------SFPV---SKD---------------- 411

  Fly   816 KTSTPQTGTPQSAAGVTPPVPLERIEERETSDSNTNKMPSTSGTTSSTGGVGGGGEQDGVGATKK 880
                                                  |||.|                      
  Rat   412 --------------------------------------PSTKG---------------------- 416

  Fly   881 NAGDDDANREEKSLAASRNSSKRAFIHSIGKHFKSKKALPLILGVGGRQKSKSENRARKAFRTIS 945
                .|.|       .|...:||             |.:.|:             :.|||.:|:|
  Rat   417 ----PDPN-------LSHQMTKR-------------KRMVLV-------------KERKAAQTLS 444

  Fly   946 FILGCFVACWTPYHVLALVEGFCRHPPCINEHLYMFSYFLCYANSPMNPFCYALANQQFKKTFTR 1010
            .||..|:..||||:::.||..||  ..|:...|:...|:|||.||.:||.||||.|:.|:|||..
  Rat   445 AILLAFIITWTPYNIMVLVSTFC--DKCVPVTLWHLGYWLCYVNSTINPICYALCNRTFRKTFKL 507

  Fly  1011 IL 1012
            :|
  Rat   508 LL 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-BNP_649764.1 7tm_1 150..>341 CDD:278431 63/190 (33%)
7tm_4 150..>336 CDD:304433 63/185 (34%)
Chrm5NP_059058.1 7tm_4 39..>166 CDD:304433 47/126 (37%)
7tm_1 46..255 CDD:278431 76/297 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..295 11/71 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..346 6/52 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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