DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-B and 5-HT2A

DIOPT Version :9

Sequence 1:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster
Sequence 2:NP_730859.1 Gene:5-HT2A / 40575 FlyBaseID:FBgn0087012 Length:930 Species:Drosophila melanogaster


Alignment Length:985 Identity:163/985 - (16%)
Similarity:286/985 - (29%) Gaps:422/985 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 DVNNTNLLLAVRNQSSDGGSTMSGSSSDSEILGPVLPPFALWQTIL--------IAICLAICIIL 146
            :|.||:|.:.:.|.:: ..:|.:.|::|      :...||:.::.|        ......:..|.
  Fly   240 NVTNTSLDMFLPNLTA-LNTTSTASTAD------MATEFAVTKSFLDYSPHGYDFLFLFVVFFIF 297

  Fly   147 TVG-GNILVLLAFIVDRNIRQPSNYFIASLAATDMLIGTVSMPFYTIYVLKGYWDLGPMLCDLWL 210
            ..| |||||.||..:||.::..:|||:.|||..|:|:....||...|....|||.||...|::::
  Fly   298 AGGLGNILVCLAVALDRKLQNVTNYFLFSLAIADLLVSLFVMPMGAIPAFLGYWPLGFTWCNIYV 362

  Fly   211 SVDYTVCLVSQYTVLLITIDRYCSVK--IAAKYRSWRTRTRVIYMVTITWIIPALL-FFISIFGW 272
            :.|...|..|...:..|::.||..::  :.:::||.:..|.:  .:.|.|::..:: ..|::.| 
  Fly   363 TCDVLACSSSILHMCFISLGRYMGIRNPLGSRHRSTKRLTGI--KIAIVWVMAMMVSSSITVLG- 424

  Fly   273 EHFTGKRDLL--PGQCAVQFLKDPIFNTALIIGYYWTTLIVLFVLYAGIYKTAYDMQKRSEAKQR 335
              ...:::::  |..|.:.       |.|..:   :.:|:..::                     
  Fly   425 --LVNEKNIMPEPNICVIN-------NRAFFV---FGSLVAFYI--------------------- 456

  Fly   336 KMQSMVALSAGAMSGMAGHAAGIGVIEEKILKTKVELAGDQTDLDSACTTVIKRLSGSGQANPLA 400
            .|..||...|               :...:|:.|...|.:..:     :.:.:||.|.....|  
  Fly   457 PMLMMVTTYA---------------LTIPLLRKKARFAAEHPE-----SELFRRLGGRFTLRP-- 499

  Fly   401 VATEEVEKMTPEQRRASAAKIQEEAKKREAAVDAEKS-------ERSSSPAFDSDEESSVNQAQQ 458
                    ...:|:....:.......|..:..|..::       |...:|:    ..|.|..|::
  Fly   500 --------QHSQQQLQMFSSFSGSNNKFLSMGDGNRNFNTEGEMEEGGAPS----RRSGVEPAER 552

  Fly   459 LITQQKLNNMRKRSSI---GLVFGAQAALLATRGKGNLQKSTTNSK---SIEAMHQYHHHQQHHH 517
            .:.||:..:.|...::   .:|.|...|    .|.|.....|.:|.   |...:.:       |.
  Fly   553 PLMQQRTASSRSMGTVSFRNVVNGTSGA----AGSGRRTTGTAHSSFRFSGAGIFR-------HS 606

  Fly   518 NQSPLQRAQSKEEMRSLHHHQNQQQPHHQHHQNQPNPPLDRPKRTSCSTLSQIAEHDRLVDLSAP 582
            :.||.....|....||        ....:.|...||            .:.::|.|.||      
  Fly   607 SSSPASSCHSTSTSRS--------SSFWRKHGGYPN------------LMDRLAIHLRL------ 645

  Fly   583 PTLLNTSDPLSPVDLAPIEVPSDQVHQGLVQTILPPPDAFQCPTPLSDDYSDRPFGNSSGNSELA 647
                                       .||                                   
  Fly   646 ---------------------------SLV----------------------------------- 648

  Fly   648 LTYDLMTNSELRYMDESSAMLASVTANSTTSPNDSVQGKPPVLPPPPPARRNPPKSNLNQSLSQT 712
                                                                ||.|:        
  Fly   649 ----------------------------------------------------PPSSH-------- 653

  Fly   713 PSQNQSPSQSLSLNLNPNHNQSQSQSIEEAVAIEKRLLVSYTGIEDFAKVRRESCIEAICLLDVP 777
                                                                             
  Fly   654 ----------------------------------------------------------------- 653

  Fly   778 GKLAADCPHRRASSPMETSSKDAILYSPMPPMPLSPKVKTSTPQTGTPQSAAGVTPPVPLERIEE 842
                   |:|||                      |.:|..|.||.|.|.:..|            
  Fly   654 -------PNRRA----------------------SVRVTISQPQLGYPTNVGG------------ 677

  Fly   843 RETSDSNTNKMPSTSGTTSSTGGVGGGGEQDGVGATKKN-----------------------AGD 884
                         ..|.|.....||.||.....|.|..:                       ||.
  Fly   678 -------------NGGRTVGATEVGAGGNGSSAGRTSNSSLGGTSLMKIATIQGPILNQSQAAGG 729

  Fly   885 DDANREEKSLAASRNSSKRAFIHSIGKHFK---SKKALPLI----LGVGGRQKSKSENRA---RK 939
            :...::.|..|......:|..:    :.||   ::.|.|.:    |....::.|.|.|..   :|
  Fly   730 NHMVQKVKPTALKPEEPQRNKV----RPFKFAFNRVATPTLNLRFLNNRSKRNSLSANAVATEQK 790

  Fly   940 AFRTISFILGCFVACWTPYHVLALVEGFCRHPPC-INEHLYMFSYFLCYANSPMNPFCYALANQQ 1003
            |.:.:..:...||.||:|:.:|.::...|  |.| :.||:.....:|.|.:|.:||..|.:.|:.
  Fly   791 ATKVLGLVFFTFVLCWSPFFILNIIFAAC--PECQVPEHVVNTCLWLGYVSSTINPIIYTIFNRT 853

  Fly  1004 FKKTFTRILK 1013
            |:..|.|:||
  Fly   854 FRAAFIRLLK 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-BNP_649764.1 7tm_1 150..>341 CDD:278431 45/195 (23%)
7tm_4 150..>336 CDD:304433 44/190 (23%)
5-HT2ANP_730859.1 7tm_4 299..>428 CDD:304433 40/133 (30%)
7tm_1 302..>477 CDD:278431 50/225 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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