DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-B and CG13579

DIOPT Version :10

Sequence 1:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster
Sequence 2:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster


Alignment Length:717 Identity:130/717 - (18%)
Similarity:214/717 - (29%) Gaps:266/717 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 DVNNTNLLL--AVRNQSSDGGSTMSGSSSDSEILGPVLPPFALWQTILIAICLAICIILTVGGNI 152
            |:...:||:  ||:| ||......||.:..:.|        .:.:|| .|:.:.:..:..:|.|.
  Fly     2 DLKTGSLLVAPAVKN-SSCSHPRYSGHNFIAHI--------GIAETI-EAVLILVLTLGVIGANC 56

  Fly   153 LVLLAFIVDRN-----IRQPSNYFIASLAATDMLIGTVSMPFYTIYVLKGYWDLGPMLCDLWLSV 212
            ||:  |:::..     |.|...|.:.|||..|:.||.:..||..:..|...|..|.:.|.:...:
  Fly    57 LVI--FVINNRRYAAYIHQQPRYLLTSLALNDLTIGLLITPFGLMPALFHCWPYGEIFCQIQALL 119

  Fly   213 DYTVCLVSQYTVLLITIDRYCSVKIAAKYRSWRTRTRVIYMVTITWIIPALLFFISIFGWEHFTG 277
            ...:...|...::.:.:|||.......:|....::...:.::::||||...:|...:....::..
  Fly   120 RGALSQQSAVILVCMAVDRYMCALHPRRYYQHSSKKGCVAILSLTWIISLTVFGFLVLPKGYYFN 184

  Fly   278 KRDLLPGQCAVQFLKDPIFNTALIIGYYWTTLIVLFVLYAGIYKTAYDMQKRSEAKQRKMQSMVA 342
            ...|:   ....|...|.:........|:.|.:||...|                          
  Fly   185 NTGLM---ACEPFYSKPSYRILSTCALYFPTTMVLMYCY-------------------------- 220

  Fly   343 LSAGAMSGMAGHAAGIGVIEEKILKTKVELAGDQTDLDSACTTVIKRLSGSGQANPLAVATEEVE 407
                   |.:.|                                :.|...:....||..|...  
  Fly   221 -------GSSFH--------------------------------MSRFRLNDPTMPLTAAAHH-- 244

  Fly   408 KMTPEQRRASAAKIQEEAKKREAAVDAEKSERSSSPAFDSDEESSVNQAQQLITQQKLNNMRKRS 472
               |.......|                                    ||||             
  Fly   245 ---PHPHPHPTA------------------------------------AQQL------------- 257

  Fly   473 SIGLVFGAQAALLATRGKGNLQKSTTNSKSIEAMHQYHHHQQHHHNQSPLQRAQSKEEMRSLHHH 537
                                               |.|.|||||....          |.|..:|
  Fly   258 -----------------------------------QMHQHQQHHQQAG----------MHSHLYH 277

  Fly   538 QNQQQPHHQHHQNQPN---------PPL-------------DRPKRTSCSTLSQIAEHDRLVDLS 580
            .:...|.|..|.|.||         ||:             ..|..|:..|       .::|.:.
  Fly   278 GHSHHPSHPSHPNHPNHHGHPHHHGPPVMGHLSMAMSMGLAGMPNMTNKIT-------KKIVPIQ 335

  Fly   581 APPTLLNTSDPLSPVDLAPIEVPSDQVHQGLVQTI----LPP-PDAFQCPTPLSDDYSDRPFGNS 640
            ...:..:||..::.:.|..|.:.:....|.:|...    ||| .|.....|.||:...: ||...
  Fly   336 EKNSSGSTSRSMAAISLGFIVMVTPWTIQEIVTACTGSKLPPFLDFLVTWTALSNSLWN-PFMYW 399

  Fly   641 SGNSEL-ALTYDLMTNSELRYMD--ESSAMLASVTANS---TTSPNDSVQGKPPVLPPPPPARRN 699
            ..||:. .::..||.|....:.|  |..:....:.||.   ||.|          :||.||:.| 
  Fly   400 LLNSDFRRMSRQLMPNKCFPHEDTPEHKSGCCHINANDFEITTLP----------IPPEPPSSR- 453

  Fly   700 PP---------------------KSNLNQSL------SQTPSQNQSPSQSLSLNLNPN-HNQSQS 736
            ||                     .|::..|:      |:|.|.::|.||.:...:... ||...:
  Fly   454 PPGGAGGGGGGPSSGGPSSGGGVASSIGGSVLGICGRSRTNSLSRSASQYIRGTMGGGVHNHQAT 518

  Fly   737 QS 738
            ::
  Fly   519 ET 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-BNP_649764.1 7tmA_mAChR_GAR-2-like 147..>323 CDD:320429 38/180 (21%)
TM helix 2 168..194 CDD:320429 9/25 (36%)
TM helix 3 206..236 CDD:320429 5/29 (17%)
TM helix 4 248..271 CDD:320429 5/22 (23%)
TM helix 5 293..322 CDD:320429 6/28 (21%)
7tm_GPCRs <932..1008 CDD:475119
TM helix 6 941..963 CDD:410628
TM helix 7 976..1001 CDD:410628
CG13579NP_001261169.1 7tm_classA_rhodopsin-like 41..>220 CDD:410626 38/183 (21%)
TM helix 1 41..65 CDD:410626 6/25 (24%)
TM helix 2 75..101 CDD:410626 9/25 (36%)
TM helix 3 113..143 CDD:410626 5/29 (17%)
TM helix 4 156..175 CDD:410626 5/18 (28%)
TM helix 5 200..220 CDD:410626 4/19 (21%)
7tm_GPCRs <334..407 CDD:475119 17/73 (23%)
TM helix 6 340..366 CDD:410628 5/25 (20%)
TM helix 7 377..402 CDD:410628 7/25 (28%)
Blue background indicates that the domain is not in the aligned region.

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