DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-B and gar-1

DIOPT Version :9

Sequence 1:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster
Sequence 2:NP_001024402.1 Gene:gar-1 / 180922 WormBaseID:WBGene00001517 Length:713 Species:Caenorhabditis elegans


Alignment Length:926 Identity:234/926 - (25%)
Similarity:385/926 - (41%) Gaps:268/926 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 PFALWQTILIAICLAICIILTVGGNILVLLAFIVDRNI-RQPSNYFIASLAATDMLIGTVSMPFY 190
            |:::...|::.|.:.:..:.|:.||.:|::|:.::||| :|.||.:|.|||.:|::||....||:
 Worm    18 PYSIPVQIVVWIIIIVLSLETIIGNAMVVMAYRIERNISKQVSNRYIVSLAISDLIIGIEGFPFF 82

  Fly   191 TIYVLKG-YWDLGPMLCDLWLSVDYTVCLVSQYTVLLITIDRYCSVKIAAKYRSWRTRTRVIYMV 254
            |:|||.| .|.||.:.|..||.:|||:||||..||||||.|||.||...|||..|::.|:...::
 Worm    83 TVYVLNGDRWPLGWVACQTWLFLDYTLCLVSILTVLLITADRYLSVCHTAKYLKWQSPTKTQLLI 147

  Fly   255 TITWIIPALLFFISIFGWEHFTGKRDLLPG-QCAVQFLKDPIFNTALIIGYYWTTLIVLFVLYAG 318
            .::|::||::|.|.|:||:..||:...:.| :|:..||.:|..|..:.:.||||||:.:.:||.|
 Worm   148 VMSWLLPAIIFGIMIYGWQAMTGQSTSMSGAECSAPFLSNPYVNMGMYVAYYWTTLVAMLILYKG 212

  Fly   319 IYKTAYDMQKRSEAKQRKMQSMVALSAGAMSGMAGHAAGIG-VIEEKILKTKVELAGDQTDLDSA 382
            |::.|.:::|:::||:|:..:::      :|...|...|:. :::.|..|.|.|    :...||.
 Worm   213 IHQAAKNLEKKAKAKERRHIALI------LSQRLGTQVGVSLMLQSKAEKEKAE----EAQKDSG 267

  Fly   383 CTTVIKRLSGSGQANPLAVATEEVEKMTPEQRRASAAKIQEEAKKREAAVDAEKSERSSSPAFDS 447
            .|:     :.:|.||.|                           :|....:.|.|:      |..
 Worm   268 YTS-----NQAGDANNL---------------------------RRFGFSEPETSQ------FRV 294

  Fly   448 DEESSVNQAQQLITQQKLNNMRKRSSIGLVFGAQAALLATRGKGNLQKSTTNSKSIEAMHQYHHH 512
            |..|:             ||:....|:                     :|.|.:::..:.:    
 Worm   295 DPNSN-------------NNLNVEGSL---------------------NTENDQNLGVIEE---- 321

  Fly   513 QQHHHNQSPLQRAQSKEEMRSLHHHQNQQQPHHQHHQNQPNPPLDRPKRTSCSTLSQIAEHDRLV 577
                .....|.|.:|.|.                 :...|:|.....:|  ||.:.::       
 Worm   322 ----ERSGFLSRRESNES-----------------YYPGPHPTAANSRR--CSEMEKV------- 356

  Fly   578 DLSAPPTLLNTSDPLSPVDLAPIEVPSDQVHQGLVQTILPPPDAFQCPTPLSDDYSDRPFGNSSG 642
                  :||:.||          .|||.:                  |.        :.:|..|.
 Worm   357 ------SLLSESD----------GVPSTR------------------PA--------KSYGRLSL 379

  Fly   643 NSELALTYDLMTNSE--------------LRYMDESSAML--ASVTANSTTSPNDSVQGKPPVLP 691
            .|..:.:..:.|..|              |...||..::|  ......:|.|.||| .....:|.
 Worm   380 RSRYSASESITTTHENDEKEVEKADSLQKLFADDELGSVLNFKEEKLKNTDSNNDS-DTTSVILQ 443

  Fly   692 PPPPARRNPPKSNLNQSLSQTPSQ----NQSPSQSLSLNLNPNHNQSQSQSIEE------AVAIE 746
            .....::|....:..:|...||.|    .|:...:..|......:..|:::||.      .|:::
 Worm   444 RSRKYKKNKRPRSSRRSEHSTPRQIAKVKQAEGTAAQLIEESVPDDDQTETIEVKRTDRWVVSMK 508

  Fly   747 KRLLVSYTGIEDFAKVRRESCIEAICLLDVPGKLAADCPHRRASSPMETSSKDAILYSPMPPMPL 811
            ||:.        .|.:||.|...               |.|.:||..:.||.:.           
 Worm   509 KRIA--------RALIRRRSTTR---------------PERGSSSNSDDSSSEV----------- 539

  Fly   812 SPKVKTSTPQTGTPQSAAGVTPPVPLERIEERETSDSNTNKMPSTSGTTSSTGGVGGGGEQDGVG 876
                                       ..||:....:|..|:|..:....:.            |
 Worm   540 ---------------------------EGEEKPEVRNNGLKIPQLTVNNENR------------G 565

  Fly   877 ATKKNAGDD---DANREEKSLAASRNSSKRAFIHSIGKHFK--SKKALPLILGVGGRQKSKSENR 936
            .|....|.|   ..|:.:..|:||..|.|.:.|.::....|  |....|:.:...||:::|:|.|
 Worm   566 ETSSQPGRDRLAPPNKTDTFLSASGVSRKISTISTVITREKVISSIFAPIAVFNRGRKQTKAEKR 630

  Fly   937 ARKAFRTISFILGCFVACWTPYHVLALVEGFCRHPPCINEHLYMFSYFLCYANSPMNPFCYALAN 1001
            |.||||||:||:|.|...|:||:::|.|.|||: ..||...||..||::||.||..|||.|||||
 Worm   631 AHKAFRTITFIVGFFAILWSPYYIMATVYGFCK-GECIPSFLYTLSYYMCYLNSSGNPFAYALAN 694

  Fly  1002 QQFKKTFTRILKGDLH 1017
            :||:..|.|:.:|:.:
 Worm   695 RQFRSAFMRMFRGNFN 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-BNP_649764.1 7tm_1 150..>341 CDD:278431 84/193 (44%)
7tm_4 150..>336 CDD:304433 83/188 (44%)
gar-1NP_001024402.1 7tm_4 39..>163 CDD:304433 58/123 (47%)
7tm_1 41..>236 CDD:278431 84/200 (42%)
7tm_4 <586..705 CDD:304433 55/119 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160056
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14467
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.040

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