DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-B and Hrh2

DIOPT Version :10

Sequence 1:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster
Sequence 2:NP_001399939.1 Gene:Hrh2 / 15466 MGIID:108482 Length:421 Species:Mus musculus


Alignment Length:261 Identity:83/261 - (31%)
Similarity:130/261 - (49%) Gaps:34/261 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 ILIAICLAICIILTVGGNILVLLAFIVDRNIRQPSNYFIASLAATDMLIGTVSMPFYTIYVLKGY 198
            :.|::.|...|.:||.||::|.||..::|.:|..:|.||.||||||:|:|.:.|||..||.|...
Mouse    19 VTISVVLTTLIFITVAGNVVVCLAVSLNRRLRSLTNCFIVSLAATDLLLGLLVMPFSAIYQLSFK 83

  Fly   199 WDLGPMLCDLWLSVDYTVCLVSQYTVLLITIDRYCSVKIAAKYRSWRTRTRVIYMVTITWIIPAL 263
            |..|.:.|:::.|:|..:|..|...:.:|::||||:|....:|....|..||...:...|:|...
Mouse    84 WSFGQVFCNIYTSLDVMLCTASILNLFMISLDRYCAVTDPLRYPVLVTPVRVAISLVFIWVISIT 148

  Fly   264 LFFISI-FGWEHFTGKR---DLLPGQCAVQFLKDPIFNTALIIGY--YWTTLIVLFVLYAGIYKT 322
            |.|:|| .||....|.|   |..  :|.||.  :.::  .|:.|.  ::..|:::.|.|..|:|.
Mouse   149 LSFLSIHLGWNSRNGTRGGNDTF--KCKVQV--NEVY--GLVDGMVTFYLPLLIMCVTYYRIFKI 207

  Fly   323 AYDMQKR-------SEAKQRKMQSMVALSA--GAM-------------SGMAGHAAGIGVIEEKI 365
            |.:..||       ..|..|:.::.|.|:|  ||.             .|:.|..|...|:|..:
Mouse   208 AREQAKRINHISSWKAATIREHKATVTLAAVMGAFIVCWFPYFTAFVYRGLRGDDAVNEVVEGIV 272

  Fly   366 L 366
            |
Mouse   273 L 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-BNP_649764.1 7tmA_mAChR_GAR-2-like 147..>323 CDD:320429 64/181 (35%)
TM helix 2 168..194 CDD:320429 15/25 (60%)
TM helix 3 206..236 CDD:320429 10/29 (34%)
TM helix 4 248..271 CDD:320429 8/23 (35%)
TM helix 5 293..322 CDD:320429 6/30 (20%)
7tm_GPCRs <932..1008 CDD:475119
TM helix 6 941..963 CDD:410628
TM helix 7 976..1001 CDD:410628
Hrh2NP_001399939.1 7tmA_Histamine_H2R 19..298 CDD:320179 83/261 (32%)
TM helix 1 20..46 CDD:320179 10/25 (40%)
TM helix 2 53..80 CDD:320179 16/26 (62%)
TM helix 3 91..121 CDD:320179 10/29 (34%)
TM helix 4 133..153 CDD:320179 6/19 (32%)
TM helix 5 178..208 CDD:320179 7/31 (23%)
TM helix 6 226..256 CDD:320179 6/29 (21%)
TM helix 7 266..291 CDD:320179 3/8 (38%)
Blue background indicates that the domain is not in the aligned region.

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