DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-B and hrh4.f5

DIOPT Version :10

Sequence 1:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster
Sequence 2:XP_004915710.2 Gene:hrh4.f5 / 101734553 XenbaseID:XB-GENE-22168466 Length:333 Species:Xenopus tropicalis


Alignment Length:220 Identity:79/220 - (35%)
Similarity:122/220 - (55%) Gaps:17/220 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 TILIAICLAICIILTVGGNILVLLAFIVDRNIRQPSNYFIASLAATDMLIGTVSMPFYTIYVLKG 197
            :||:.|.|::.::|.|.||.:|:|||||||.:|..||:|:.:|:..|.|:|.||:|.|..|.:.|
 Frog    31 SILLIIFLSLMVVLIVIGNSVVILAFIVDRRLRTRSNFFLLNLSMCDFLVGAVSIPMYIPYRVTG 95

  Fly   198 YWDLGPMLCDLWLSVDYTVCLVSQYTVLLITIDRYCSVKIAAKYRSWRTRTR--VIYMVTITWII 260
            .|.||..||.||:::|:|:...|.|:|:||:.||:.||..|..:||.:.|.|  .:.|: :.||:
 Frog    96 KWLLGKFLCKLWITIDFTITTASAYSVVLISYDRFLSVNNAVVHRSLQNRHRQTALNMI-LVWIL 159

  Fly   261 PALLFFISIFGWEHFTGKRDLLPGQCAVQFLKDPIFNT--ALIIGYYWTTLIVLFV---LYAGIY 320
            ..|::..::..|:..||...|....|...|| |..:.|  |..:.:....|.:.|.   :|.||.
 Frog   160 SFLVYGPAVLLWDIITGTSHLQGDSCHAGFL-DIWYYTLGASTLDFMCPLLSISFFNLRIYLGII 223

  Fly   321 KTAYDMQKRSEAKQR-KMQSMVALS 344
                   |||..:|. .|.|.:..|
 Frog   224 -------KRSSKRQNCSMSSSLPFS 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-BNP_649764.1 7tmA_mAChR_GAR-2-like 147..>323 CDD:320429 67/182 (37%)
TM helix 2 168..194 CDD:320429 11/25 (44%)
TM helix 3 206..236 CDD:320429 13/29 (45%)
TM helix 4 248..271 CDD:320429 5/24 (21%)
TM helix 5 293..322 CDD:320429 8/33 (24%)
7tm_GPCRs <932..1008 CDD:475119
TM helix 6 941..963 CDD:410628
TM helix 7 976..1001 CDD:410628
hrh4.f5XP_004915710.2 7tm_GPCRs 32..332 CDD:475119 79/219 (36%)
TM helix 1 34..58 CDD:410628 10/23 (43%)
TM helix 2 67..89 CDD:410628 9/21 (43%)
TM helix 3 105..127 CDD:410628 9/21 (43%)
TM helix 4 151..167 CDD:410628 4/16 (25%)
TM helix 5 193..216 CDD:410628 4/22 (18%)
TM helix 6 297..319 CDD:410628
Blue background indicates that the domain is not in the aligned region.

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