DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-B and chrm1

DIOPT Version :9

Sequence 1:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster
Sequence 2:XP_004913717.1 Gene:chrm1 / 100490434 XenbaseID:XB-GENE-22061118 Length:521 Species:Xenopus tropicalis


Alignment Length:912 Identity:180/912 - (19%)
Similarity:280/912 - (30%) Gaps:442/912 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 TMSGS------SSDSEILGPVLPPFALWQTILIAICLAICIILTVGGNILVLLAFIVDRNIRQPS 168
            ||:.|      |:.:|...| |...|:|:.:||.|...|..::||.||:||||||.|:.:::..:
 Frog    19 TMASSTVTPLTSNATEEYDP-LGGHAVWEVVLIVITTGILSLVTVIGNVLVLLAFKVNSDLKTVN 82

  Fly   169 NYFIASLAATDMLIGTVSMPFYTIYVLKGYWDLGPMLCDLWLSVDYTVCLVSQYTVLLITIDRYC 233
            |||:.|||..|::||.:||..||.|::.|.|.|||:.|||||::||.....|...:|:|:.|||.
 Frog    83 NYFLLSLACADIIIGALSMNLYTTYIVMGRWALGPVSCDLWLALDYVASNASVMNLLIISFDRYF 147

  Fly   234 SVKIAAKYRSWRTRTRVIYMVTITWIIPALLFFISIFGWEHFTGKRDLLPGQCAVQFLKDPIFNT 298
            |:.....||:.||..|...|:.:.|.|..:|:..:|..|::..|:|.:....|.:||...||...
 Frog   148 SITRPLTYRAKRTPRRAAIMIGMAWFISFVLWAPAIIFWQYIVGERTVEATDCYIQFFSQPIITF 212

  Fly   299 ALIIGYYWTTLIVLFVLYAGIYKTAYDMQKRSEAKQRKMQSMVALSAGAMSGMAGHAAGIGVIEE 363
            ...|..::..:.::.:||..:|:   :.:.||:                                
 Frog   213 GTAIAAFYLPVTIMIILYWRVYR---ETENRSK-------------------------------- 242

  Fly   364 KILKTKVELAGDQTDLDSACTTVIKRLSGSG---QANPLAVATEEVEKMTPEQRRASAAKIQEEA 425
                   ||||               |.|||   .::|||:.                       
 Frog   243 -------ELAG---------------LQGSGTDHTSHPLALG----------------------- 262

  Fly   426 KKREAAVDAEKSERSSSPAFDSDEESSVNQAQQLITQQKLNNMRKRSSIGLVFGAQAALLATRGK 490
                       |.||.|.: .:.|...:::.|:.:         .|:..|..|..|..       
 Frog   263 -----------SVRSGSSS-GAGESERLSRGQRTV---------PRAKQGCCFPRQLT------- 299

  Fly   491 GNLQKSTTNSKSIEAMHQYHHHQQHHHNQSPLQRAQSKEEMRSLHHHQNQQQPHHQHHQNQPNPP 555
                                                |...:||...|::                
 Frog   300 ------------------------------------SNPSLRSYPEHRS---------------- 312

  Fly   556 LDRPKRTSCSTLSQIAEHDRLVDLSAPPTLLNTSDPLSPVDLAPIEVPSDQVHQGLVQTILPPPD 620
                 ..||:|:...|..|.|..                                          
 Frog   313 -----NGSCNTMEDAASADSLSS------------------------------------------ 330

  Fly   621 AFQCPTPLSDDYSDRPFGNSSGNSELALTYDLMTNSELRYMDESSAMLASVTANSTTSPNDSVQG 685
                    |.:..|||:                   |::.:..:...|..|:         ||.|
 Frog   331 --------SSEAEDRPY-------------------EMKNICSAVIRLPMVS---------SVVG 359

  Fly   686 KPPVLPPPPPARRNPPKSNLNQSLSQTPSQNQSPSQSLSLNLNPNHNQSQSQSIEEAVAIEKRLL 750
                                      ||..::..|.:|.                          
 Frog   360 --------------------------TPKGSRGSSDTLG-------------------------- 372

  Fly   751 VSYTGIEDFAKVRRESCIEAICLLDVPGKLAADCPHRRASSPMETSSKDAILYSPMPPMPLSPKV 815
                                                 |.....||:.                  
 Frog   373 -------------------------------------RGDIEAETNG------------------ 382

  Fly   816 KTSTPQTGTPQSAAGVTPPVPLERIEERETSDSNTNKMPSTSGTTSSTGGVGGGGEQDGVGATKK 880
                       ..:.||          |:||.:....:|||.....|                :|
 Frog   383 -----------GKSEVT----------RKTSRAQVTALPSTIIRAKS----------------EK 410

  Fly   881 NAGDDDANREEKSLAASRNSSKRAFIHSIGKHFKSKKALPLILGVGGRQKSKSENRARKAFRTIS 945
            |                              |.             |::||.|..:.:||.:|:|
 Frog   411 N------------------------------HH-------------GKRKSNSLIKEKKAAKTLS 432

  Fly   946 FILGCFVACWTPYHVLALVEGFCRHPPCINEHLYMFSYFLCYANSPMNPFCYALANQQFKKTFTR 1010
            .||..|:..||||:::.||..||  |.|:.:.|:...|:|||.||.:||.||||.|:.|::||..
 Frog   433 AILLAFILTWTPYNIMVLVSTFC--PDCVPKKLWELGYWLCYVNSTVNPMCYALCNRSFRRTFKM 495

  Fly  1011 IL 1012
            :|
 Frog   496 LL 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-BNP_649764.1 7tm_1 150..>341 CDD:278431 66/190 (35%)
7tm_4 150..>336 CDD:304433 66/185 (36%)
chrm1XP_004913717.1 7tmA_mAChR_M1 48..493 CDD:341356 168/876 (19%)
TM helix 1 49..75 CDD:341356 14/25 (56%)
TM helix 2 82..108 CDD:341356 13/25 (52%)
TM helix 3 120..150 CDD:341356 14/29 (48%)
TM helix 4 162..185 CDD:341356 6/22 (27%)
TM helix 5 207..236 CDD:341356 6/31 (19%)
TM helix 6 422..452 CDD:341356 12/29 (41%)
TM helix 7 461..486 CDD:341356 13/24 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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