DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-B and hrh4.b2

DIOPT Version :10

Sequence 1:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster
Sequence 2:XP_031760447.1 Gene:hrh4.b2 / 100485915 XenbaseID:XB-GENE-22168371 Length:390 Species:Xenopus tropicalis


Alignment Length:276 Identity:90/276 - (32%)
Similarity:135/276 - (48%) Gaps:56/276 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 LQWYRNFDVNNTNLLLAVRNQSSDGGSTMSGSSSDSEILGPVLPPFALWQTILIAICLAICIILT 147
            :|.||..:.:..||.|      ...|||...|.:               ..|||...:::.|:||
 Frog     1 MQIYRLGNDSGINLTL------DTAGSTTQFSDA---------------VNILIIALISLLILLT 44

  Fly   148 VGGNILVLLAFIVDRNIRQPSNYFIASLAATDMLIGTVSMPFYTIYVLKGYWDLGPMLCDLWLSV 212
            ||||.||:|||.|::.:|..||:|:.:|:..|.::||.::|.|..|:|.|.|.||..||.|||.|
 Frog    45 VGGNTLVILAFFVEKRLRNQSNFFLLNLSIADFILGTFAIPLYVPYLLTGKWLLGKFLCKLWLIV 109

  Fly   213 DYTVCLVSQYTVLLITIDRYCSVKIAAKYRSWRTR-TRVIYMVTITWIIPALLFFISIFGWEHFT 276
            |||:|..|.:.|.||:.||:.||..|..|||.:.| .|.:..:...||:..||:..:|..|:...
 Frog   110 DYTMCTASAFNVALISWDRFLSVTQAVLYRSQQNRPCRTVIKMAAVWILSFLLYGPAIIFWDFVP 174

  Fly   277 GKRDLLPGQCAVQFLKDPIFNTALIIGYYWTTLIVL------FVL--------YAGIYKTAYDMQ 327
            ...::....|              :.|:|:|...:|      |||        ...||   .:::
 Frog   175 STEEIPENIC--------------VAGFYYTWYYLLTASAFDFVLPLISISFFNLSIY---CNIK 222

  Fly   328 KRSEAKQRKMQSMVAL 343
            |||   :||||:.::|
 Frog   223 KRS---RRKMQNSISL 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-BNP_649764.1 7tmA_mAChR_GAR-2-like 147..>323 CDD:320429 67/190 (35%)
TM helix 2 168..194 CDD:320429 9/25 (36%)
TM helix 3 206..236 CDD:320429 16/29 (55%)
TM helix 4 248..271 CDD:320429 6/22 (27%)
TM helix 5 293..322 CDD:320429 9/42 (21%)
7tm_GPCRs <932..1008 CDD:475119
TM helix 6 941..963 CDD:410628
TM helix 7 976..1001 CDD:410628
hrh4.b2XP_031760447.1 7tmA_Histamine_H3R_H4R 44..374 CDD:320176 75/212 (35%)
TM helix 2 65..92 CDD:320176 10/26 (38%)
TM helix 3 103..133 CDD:320176 16/29 (55%)
TM helix 4 148..166 CDD:320176 4/17 (24%)
TM helix 5 191..221 CDD:320176 7/32 (22%)
TM helix 6 302..332 CDD:320176
TM helix 7 342..367 CDD:320176
Blue background indicates that the domain is not in the aligned region.

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